Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034300958.1 |
| length | 900 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 7 |
| gene id | LOC113531468 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 14057405 ~ 14070855 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K19939 | RPH3AL; Rab effector Noc2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU458569 | lncRNA | downstream | 126707 | 13930487 ~ 13930698 (-) | True | G386873 |
| TU458563 | lncRNA | downstream | 140604 | 13911262 ~ 13916801 (-) | True | G386868 |
| TU458564 | lncRNA | downstream | 140604 | 13911262 ~ 13916801 (-) | False | G386868 |
| XR_004577399.1 | lncRNA | downstream | 180599 | 13876017 ~ 13876806 (-) | True | LOC117596230 |
| TU458541 | lncRNA | downstream | 203350 | 13853837 ~ 13854055 (-) | True | G386849 |
| TU458748 | lncRNA | upstream | 268461 | 14339316 ~ 14340196 (-) | True | G387048 |
| TU459030 | lncRNA | upstream | 799664 | 14870519 ~ 14877458 (-) | True | G387277 |
| TU459094 | lncRNA | upstream | 948162 | 15019017 ~ 15026847 (-) | False | nrgna |
| TU459229 | lncRNA | upstream | 1127751 | 15198606 ~ 15204665 (-) | True | G387434 |
| TU459231 | lncRNA | upstream | 1127751 | 15198606 ~ 15204665 (-) | False | G387434 |
| XM_026922275.2 | mRNA | downstream | 68052 | 13921740 ~ 13989353 (-) | True | LOC113531503 |
| XM_026922406.2 | mRNA | downstream | 148948 | 13892212 ~ 13908457 (-) | True | castor2 |
| XM_026922295.2 | mRNA | downstream | 195250 | 13859139 ~ 13862155 (-) | True | polr2j |
| XM_026922320.2 | mRNA | downstream | 199287 | 13855219 ~ 13858118 (-) | True | alkbh4 |
| XM_034300486.1 | mRNA | downstream | 205221 | 13843178 ~ 13852184 (-) | False | lrwd1 |
| XM_026921697.2 | mRNA | upstream | 3686 | 14074541 ~ 14085085 (-) | True | tmem248 |
| XM_026921693.2 | mRNA | upstream | 22709 | 14093564 ~ 14103564 (-) | True | lig3 |
| XM_034300633.1 | mRNA | upstream | 100447 | 14171302 ~ 14409340 (-) | False | tmem132e |
| XM_026922019.2 | mRNA | upstream | 100447 | 14171302 ~ 14409340 (-) | True | tmem132e |
| XM_026922018.2 | mRNA | upstream | 100447 | 14171302 ~ 14249109 (-) | False | tmem132e |
| XR_003403286.1 | other | downstream | 141908 | 13915364 ~ 13915497 (-) | True | LOC113531684 |
| XR_003403280.1 | other | downstream | 244076 | 13813233 ~ 13813329 (-) | True | LOC113531678 |
| XR_003403212.2 | other | downstream | 2358861 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
| XR_004577405.1 | other | downstream | 2429823 | 11621662 ~ 11627582 (-) | False | map1b |
| TU459046 | other | upstream | 845807 | 14916662 ~ 14923384 (-) | True | ccdc84 |
| XR_003403223.2 | other | upstream | 2306730 | 16377585 ~ 16380787 (-) | False | LOC113531235 |
| trnam-cau_50 | other | upstream | 2360537 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
| trnam-cau_51 | other | upstream | 2364343 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| TU460427 | other | upstream | 2895433 | 16966288 ~ 16970026 (-) | False | crx |
