RNA id: TCONS_00008495


Basic Information

Item Value
RNA id TCONS_00008495
length 498
lncRNA type read_through
GC content 0.49
exon number 2
gene id XLOC_004362
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 42731890 ~ 42739148 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTGTGGGGTGGAAGACATCCTGGAGTTTTCAAAATTTCAACTGGAGTTGAAATAGGTGAAACCGTGAAAATAATTGACACGATCGACAGAGAACCAAATGCCTACACAGAAGGCACGTACGCTCGACATAAAGGATATAAGGCAGGTCTTAAAAATGAGCCAGGCCAGAGGATTCCCAAGGCTGGGTATTACGCAGAAGCAGGAGTTGGACGAGCTCGAGCTGAATGCAGTGTGTTTGAGGCTGAAGCTAAAGGCCCCAATGCATCAATTGGAGCTGAAATCAGTGTGGTTGGAGCAGGAGCAATGGCTCGAGCTGAAATCGCCAGCGCATCAGCTAATGCCGGTCCACTCGGTGTCAAAGTGGGACTTGGACTCGATACGGGTGCATCTATTGGTGTGGATGGGGTGGAGGCAAAATTCCTGGGAACAGGAGTCTCAATCGGTCCAAAAACCAGTGTGTCTGCTCTGGGTTCAGAAGTGTCATGTTCAGTCATGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008494 lncRNA downstream 582691 42151444 ~ 42152573 (-) True XLOC_004356
TCONS_00008492 lncRNA downstream 609982 42113072 ~ 42125282 (-) True XLOC_004352
TCONS_00008868 lncRNA downstream 610993 42122748 ~ 42124271 (-) True XLOC_004353
TCONS_00008493 lncRNA downstream 611012 42121855 ~ 42124252 (-) False XLOC_004353
TCONS_00008867 lncRNA downstream 690983 42042562 ~ 42044281 (-) True XLOC_004349
TCONS_00008496 lncRNA upstream 6686 42742534 ~ 42745180 (-) True XLOC_004363
TCONS_00008497 lncRNA upstream 17053 42752901 ~ 42754000 (-) False XLOC_004364
TCONS_00008869 lncRNA upstream 73666 42809514 ~ 42817704 (-) True XLOC_004365
TCONS_00008870 lncRNA upstream 326034 43061882 ~ 43062986 (-) True XLOC_004368
TCONS_00008871 lncRNA upstream 465687 43201535 ~ 43204207 (-) True XLOC_004371
TCONS_00008272 mRNA downstream 5201 42720203 ~ 42730063 (-) True XLOC_004361
TCONS_00008271 mRNA downstream 180974 42532464 ~ 42554290 (-) True XLOC_004360
TCONS_00008270 mRNA downstream 209814 42506052 ~ 42525450 (-) True XLOC_004359
TCONS_00008269 mRNA downstream 262323 42466834 ~ 42472941 (-) True XLOC_004358
TCONS_00008260 mRNA downstream 316890 42304585 ~ 42418374 (-) False XLOC_004357
TCONS_00008274 mRNA upstream 10521 42746369 ~ 42750626 (-) False XLOC_004364
TCONS_00008275 mRNA upstream 10521 42746369 ~ 42752884 (-) False XLOC_004364
TCONS_00008276 mRNA upstream 14366 42750214 ~ 42755108 (-) False XLOC_004364
TCONS_00008277 mRNA upstream 18928 42754776 ~ 42761293 (-) True XLOC_004364
TCONS_00008278 mRNA upstream 175056 42910904 ~ 42918971 (-) True XLOC_004366
TCONS_00008250 other downstream 1360138 41375011 ~ 41375126 (-) True XLOC_004339
TCONS_00008244 other downstream 1650901 41078191 ~ 41084363 (-) True XLOC_004334
TCONS_00008236 other downstream 2039128 40678213 ~ 40696136 (-) True XLOC_004327
TCONS_00008222 other downstream 2552468 40182681 ~ 40182796 (-) True XLOC_004319
TCONS_00008210 other downstream 3645273 39089875 ~ 39089991 (-) True XLOC_004308
TCONS_00008295 other upstream 1387479 44123327 ~ 44123458 (-) True XLOC_004381
TCONS_00008303 other upstream 1601309 44337157 ~ 44339220 (-) True XLOC_004385
TCONS_00008317 other upstream 1871003 44606851 ~ 44613734 (-) False XLOC_004396
TCONS_00008372 other upstream 2695685 45431533 ~ 45435014 (-) False XLOC_004416

Expression Profile

//