Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU444948 |
| length | 448 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G375739 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 14139379 ~ 14141880 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU444906 | lncRNA | upstream | 96765 | 14036341 ~ 14042614 (+) | False | G375711 |
| TU444909 | lncRNA | upstream | 96765 | 14036341 ~ 14042614 (+) | True | G375711 |
| TU444905 | lncRNA | upstream | 117844 | 14021150 ~ 14021535 (+) | True | G375710 |
| TU444671 | lncRNA | upstream | 342844 | 13702127 ~ 13796535 (+) | True | G375496 |
| XR_004577349.1 | lncRNA | upstream | 584779 | 13534288 ~ 13554600 (+) | False | LOC117596173 |
| TU444983 | lncRNA | downstream | 49018 | 14190898 ~ 14192300 (+) | True | G375771 |
| TU444987 | lncRNA | downstream | 61795 | 14203675 ~ 14204359 (+) | True | G375774 |
| XR_004577348.1 | lncRNA | downstream | 105807 | 14247687 ~ 14267611 (+) | True | LOC113537225 |
| XR_004577353.1 | lncRNA | downstream | 185489 | 14327369 ~ 14328701 (+) | True | LOC117596176 |
| TU445171 | lncRNA | downstream | 218409 | 14360289 ~ 14360512 (+) | False | LOC113537358 |
| XM_026932238.2 | mRNA | upstream | 12086 | 14121038 ~ 14127293 (+) | False | LOC113537635 |
| XM_026932236.2 | mRNA | upstream | 12086 | 14121039 ~ 14127293 (+) | True | LOC113537635 |
| XM_026932235.2 | mRNA | upstream | 12086 | 14121041 ~ 14127293 (+) | False | LOC113537635 |
| XM_026932234.2 | mRNA | upstream | 12086 | 14121055 ~ 14127293 (+) | False | LOC113537635 |
| XM_034299978.1 | mRNA | upstream | 54725 | 14075086 ~ 14084654 (+) | False | LOC113537316 |
| XM_026932208.2 | mRNA | downstream | 33012 | 14174892 ~ 14180996 (+) | True | LOC113537615 |
| XM_026931694.2 | mRNA | downstream | 196862 | 14338742 ~ 14340428 (+) | True | junba |
| XM_026931695.2 | mRNA | downstream | 196862 | 14338742 ~ 14340428 (+) | False | junba |
| XM_026931793.2 | mRNA | downstream | 216862 | 14358742 ~ 14360604 (+) | True | LOC113537358 |
| XM_026931792.2 | mRNA | downstream | 232686 | 14374566 ~ 14375580 (+) | True | LOC113537357 |
| TU444908 | other | upstream | 96765 | 14023250 ~ 14042614 (+) | False | G375711 |
| XR_004577362.1 | other | upstream | 118248 | 14016523 ~ 14021131 (+) | False | gpalpp1 |
| TU442901 | other | upstream | 3129759 | 11006008 ~ 11009620 (+) | True | G373955 |
| TU442162 | other | upstream | 4262826 | 9839096 ~ 9876553 (+) | True | LOC117596102 |
| TU441073 | other | upstream | 5985524 | 8149960 ~ 8153855 (+) | True | G372351 |
| TU445701 | other | downstream | 937860 | 15079740 ~ 15091481 (+) | False | rfx1b |
| TU445724 | other | downstream | 972592 | 15114472 ~ 15116856 (+) | False | smdt1b |
| trnaq-cug_18 | other | downstream | 1207374 | 15349254 ~ 15349325 (+) | True | trnaq-cug_18 |
| TU445810 | other | downstream | 1279519 | 15421399 ~ 15424798 (+) | True | G376467 |
| TU445848 | other | downstream | 1349166 | 15491046 ~ 15492518 (+) | False | G376488 |
