Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU444905 |
| length | 386 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G375710 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047620.1 |
| NCBI id | CM018566.1 |
| chromosome length | 19313417 |
| location | 14021150 ~ 14021535 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU444671 | lncRNA | upstream | 224615 | 13702127 ~ 13796535 (+) | True | G375496 |
| XR_004577349.1 | lncRNA | upstream | 466550 | 13534288 ~ 13554600 (+) | False | LOC117596173 |
| XR_004577350.1 | lncRNA | upstream | 466550 | 13548497 ~ 13554600 (+) | True | LOC117596173 |
| TU444602 | lncRNA | upstream | 542891 | 13476476 ~ 13478259 (+) | True | G375431 |
| TU444590 | lncRNA | upstream | 584093 | 13436647 ~ 13437057 (+) | True | G375422 |
| TU444906 | lncRNA | downstream | 14806 | 14036341 ~ 14042614 (+) | False | G375711 |
| TU444909 | lncRNA | downstream | 14806 | 14036341 ~ 14042614 (+) | True | G375711 |
| TU444948 | lncRNA | downstream | 117844 | 14139379 ~ 14141880 (+) | True | G375739 |
| TU444983 | lncRNA | downstream | 169363 | 14190898 ~ 14192300 (+) | True | G375771 |
| TU444987 | lncRNA | downstream | 182140 | 14203675 ~ 14204359 (+) | True | G375774 |
| XM_026931619.2 | mRNA | upstream | 19 | 14016523 ~ 14021131 (+) | True | gpalpp1 |
| XM_026932034.2 | mRNA | upstream | 78227 | 13917963 ~ 13942923 (+) | True | klf12a |
| XM_026931640.2 | mRNA | upstream | 186159 | 13832326 ~ 13834991 (+) | True | kctd12.2 |
| XM_026931701.2 | mRNA | upstream | 208784 | 13802400 ~ 13812366 (+) | True | slc5a7a |
| XM_026932042.2 | mRNA | upstream | 226816 | 13788562 ~ 13794334 (+) | True | arl6 |
| XM_026932165.2 | mRNA | downstream | 1954 | 14023489 ~ 14033839 (+) | True | gtf2f2a |
| XM_026932166.2 | mRNA | downstream | 1957 | 14023492 ~ 14033839 (+) | False | gtf2f2a |
| XM_026932360.2 | mRNA | downstream | 22424 | 14043959 ~ 14060786 (+) | True | LOC113537730 |
| XM_026932359.2 | mRNA | downstream | 22424 | 14043959 ~ 14060786 (+) | False | LOC113537730 |
| XM_034299978.1 | mRNA | downstream | 53551 | 14075086 ~ 14084654 (+) | False | LOC113537316 |
| XR_004577362.1 | other | upstream | 19 | 14016523 ~ 14021131 (+) | False | gpalpp1 |
| TU442901 | other | upstream | 3011530 | 11006008 ~ 11009620 (+) | True | G373955 |
| TU442162 | other | upstream | 4144597 | 9839096 ~ 9876553 (+) | True | LOC117596102 |
| TU441073 | other | upstream | 5867295 | 8149960 ~ 8153855 (+) | True | G372351 |
| XR_003403794.1 | other | upstream | 7302324 | 6718694 ~ 6718826 (+) | True | LOC113537770 |
| TU444908 | other | downstream | 1715 | 14023250 ~ 14042614 (+) | False | G375711 |
| TU445701 | other | downstream | 1058205 | 15079740 ~ 15091481 (+) | False | rfx1b |
| TU445724 | other | downstream | 1092937 | 15114472 ~ 15116856 (+) | False | smdt1b |
| trnaq-cug_18 | other | downstream | 1327719 | 15349254 ~ 15349325 (+) | True | trnaq-cug_18 |
| TU445810 | other | downstream | 1399864 | 15421399 ~ 15424798 (+) | True | G376467 |
