GENE ID: ENSDARG00000043128

Symbol Location Gene type Genome version Species
cldne 15: 2638884 ~ 2640966 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000043128 (cldne), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Periderm cells (cluster: 14)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (24hpf) head baseline 24hpf, untreatment Periderm cells (cluster: 8)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (2dpf) head baseline 2dpf, untreatment Eye (cluster: 15)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS Epithelial cells (cluster: 9)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae Support cells (cluster: 2)
    		 marker
    		 DOI:10.1016/j.cub.2020.01.027
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Periderm cells (cluster: 36)
    		 marker
    		 DOI:10.7554/eLife.44431
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Cranial ganglion (cluster: 22)
    		 potential marker
    		 NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Eye (cluster: 13)
    		 potential marker
    		 NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Eye (cluster: 17)
    		 potential marker
    		 NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Epithelial cells (cluster: 12)
    		 potential marker
    		 NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Periderm cells (cluster: 16)
    Epidermal cells (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Periderm cells (cluster: 16)
    Epidermal cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 11)
    		 potential marker
    		 NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 10)
    		 potential marker
    		 NA
    GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled) Enveloping layer cells (cluster: 7)
    		 potential marker
    		 NA
    GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled) Enveloping layer cells (cluster: 8)
    		 potential marker
    		 NA
    PRJNA734348 (dome, control) embryo baseline 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 6)
    		 potential marker
    		 NA
    PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 5)
    		 potential marker
    		 NA
    PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA734348 (shield, dnmt1) embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) Germ ring (cluster: 1)
    Enveloping layer cells (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos NCC ionocytes (cluster: 1)
    HR ionocytes (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 13)
    Periderm cells (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 13)
    		 potential marker
    		 NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 14)
    Integument Ionocyte (cluster: 27)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Periderm cells (cluster: 17)
    		 potential marker
    		 NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Periderm cells (cluster: 17)
    		 potential marker
    		 NA
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Periderm cells (cluster: 11)
    		 potential marker
    		 NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Periderm cells (cluster: 9)
    		 potential marker
    		 NA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae Support cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Neuronal progenitor (cluster: 4)
    Endothelium (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Endothelium (cluster: 3)
    Endothelium (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Endothelium (cluster: 4)
    Endothelium (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Gills (cluster: 13)
    		 potential marker
    		 NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Gills (cluster: 8)
    		 potential marker
    		 NA
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells Otic (cluster: 7)
    		 potential marker
    		 NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
    GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
    GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
    GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT

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