GENE ID: ENSDARG00000018404

Symbol Location Gene type Genome version Species
krt18a.1 23: 10347851 ~ 10351754 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000018404 (krt18a.1), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Endothelium (cluster: 15)
    		 potential marker
    		 NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Radial glia (cluster: 7)
    		 potential marker
    		 NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Epithelial cells (cluster: 12)
    Fibroblasts (cluster: 16)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Fibroblasts (cluster: 14)
    Epithelial cells (cluster: 15)
    Epithelial cells (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Osteoblast (cluster: 1)
    Chondrocytes (cluster: 2)
    Osteoblast (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Osteoblast (cluster: 1)
    Osteoblast (cluster: 6)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Endothelium (cluster: 3)
    		 potential marker
    		 NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Endothelium (cluster: 3)
    Epithelial cells (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Endothelium (cluster: 3)
    		 potential marker
    		 NA
    GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled) Enveloping layer cells (cluster: 7)
    		 potential marker
    		 NA
    GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled) Enveloping layer cells (cluster: 8)
    		 potential marker
    		 NA
    PRJNA734348 (dome, control) embryo baseline 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 6)
    		 potential marker
    		 NA
    PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 5)
    		 potential marker
    		 NA
    PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA734348 (shield, dnmt1) embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) Germ ring (cluster: 1)
    		 potential marker
    		 NA
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells Oligodendrocyte precursor cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos NCC ionocytes (cluster: 1)
    NaR ionocytes (cluster: 11)
    HR ionocytes (cluster: 5)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells Melanoma cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Epithelial cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Cranial neural crest (cluster: 1)
    Endothelium (cluster: 21)
    Chondrocytes (cluster: 6)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Somites (cluster: 18)
    Endothelium (cluster: 26)
    Cranial neural crest (cluster: 27)
    Chondrocytes (cluster: 5)
    Cranial neural crest (cluster: 6)
    		 potential marker
    potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Somites (cluster: 11)
    Epidermal cells (cluster: 12)
    Endothelium (cluster: 16)
    Floor plate (cluster: 23)
    Integument Ionocyte (cluster: 27)
    Cranial neural crest (cluster: 3)
    		 potential marker
    potential marker
    potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    NA
    NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Epithelialized macrophages (cluster: 2)
    		 potential marker
    		 NA
    PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Endocardial endothelial cells (cluster: 1)
    Coronary endothelial cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Endocardial endothelial cells (cluster: 1)
    Coronary endothelial cells (cluster: 11)
    Fibroblasts (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Fibroblasts (cluster: 10)
    Endocardial endothelial cells (cluster: 3)
    Coronary endothelial cells (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Endocardial endothelial cells (cluster: 1)
    		 potential marker
    		 NA
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Coronary endothelial cells (cluster: 12)
    Endocardial endothelial cells (cluster: 3)
    Fibroblasts (cluster: 4)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Endocardial endothelial cells (cluster: 1)
    		 potential marker
    		 NA
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Endocardial cells (cluster: 3)
    Endocardial cells (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Pancreas duct epithelial cells (cluster: 7)
    		 potential marker
    		 NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Endothelium (cluster: 9)
    		 potential marker
    		 NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Basal cells (cluster: 2)
    Neuronal progenitor (cluster: 4)
    Endothelium (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Endothelium (cluster: 3)
    Basal cells (cluster: 4)
    Endothelium (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Endothelium (cluster: 4)
    Basal cells (cluster: 6)
    Endothelium (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Pancreas duct epithelial cells (cluster: 7)
    		 potential marker
    		 NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Thyrocytes (cluster: 7)
    		 potential marker
    		 NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Gills (cluster: 8)
    		 potential marker
    		 NA
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases Melanoma cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases Melanoma cells (cluster: 2)
    		 potential marker
    		 NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Epithelial cells (cluster: 7)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 8)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 9)
    		 potential marker
    		 NA
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (12hpf) embryo baseline 12hpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
    PRJNA641144 (D_PRO) tumor disease adult, ZMEL1-PRO cells in vitro individual culture
    PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture
    PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors
    PRJNA641144 (C_PRO) tumor disease adult, ZMEL1-PRO cells in vitro co-culture
    PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture
    PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT

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