G212596


Basic Information

Item Value
gene id G212596
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1866558 ~ 1866975 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241142
GGTGGATTAACTTTGTTTTTGAAGAAAATTCTCCCTCAACTCTACCGAAATTTGTCTGCACGAATCATTTCACACCGGACTGCTTTGTGAACGAATGTCAATACAAAGGGACAATACAAAACAGAGGTTGTGCTAAAAAGTCATTACTCAAGGATAGATCAGTTCGTGATCCAGCTTACAGTCTCCAGAGTGATACTGGATACGGCAGTAATGAAGGTGAGAGCACTTTATTACAGTTCATCGGAGTTGATTTACGGATATAAAGTTTATTAAGCACCACCTGAAAAGGCATAGGGTCTTCATATATTTGTTTACTGTTAGTTGTAATGAGTGTTTCTGTGTACTTCCCTGTGTATGTTGATGATAATGCAAGAGAAAGAGAAAGAGTTTATGGATAATATTTTAATGCACACTTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241142 True 418 lncRNA 0.37 1 1866558 1866975

Neighbor

gene id symbol gene type direction distance location
CI01000050_01803081_01804190 B3GALT4 coding upstream 59600 1800608 ~ 1806958 (+)
CI01000050_01701779_01712905 RBSN coding upstream 153480 1701614 ~ 1713078 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 coding upstream 167823 1691374 ~ 1698973 (+)
CI01000050_01674592_01678560 SULT1ST1, SULT1ST2, SULT1ST3 coding upstream 187998 1674592 ~ 1678560 (+)
CI01000050_01662474_01662718 NA coding upstream 203822 1662474 ~ 1662736 (+)
CI01000050_01877310_01902523 ADGRD2 coding downstream 10335 1877310 ~ 1902773 (+)
CI01000050_02211327_02213220 NA coding downstream 343819 2210794 ~ 2213489 (+)
CI01000050_02268620_02283626 NADK, NADKA coding downstream 401645 2268620 ~ 2285331 (+)
CI01000050_02290349_02305843 WDR46 coding downstream 421952 2288927 ~ 2306023 (+)
CI01000050_02308087_02311804 NA coding downstream 440264 2307239 ~ 2311898 (+)
G212592 NA non-coding upstream 11635 1854713 ~ 1854923 (+)
G212564 NA non-coding upstream 113250 1750024 ~ 1753308 (+)
G212444 NA non-coding upstream 118535 1734059 ~ 1748023 (+)
G212450 NA non-coding upstream 120488 1733004 ~ 1746070 (+)
G212560 NA non-coding upstream 143483 1722871 ~ 1723075 (+)
G212609 NA non-coding downstream 63184 1930159 ~ 1931975 (+)
G212430 NA non-coding downstream 89056 1956031 ~ 1988166 (+)
G212621 NA non-coding downstream 193167 2060142 ~ 2064799 (+)
G212670 NA non-coding downstream 226884 2093859 ~ 2094122 (+)
G212631 NA non-coding downstream 274356 2141331 ~ 2147657 (+)
CI01000050_01296683_01297763 SELENOK other upstream 566952 1296365 ~ 1298255 (+)
G212184 NA other upstream 1432352 433684 ~ 434206 (+)
G212006 NA other upstream 1728547 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 1840146 12079 ~ 26412 (+)
G212927 NA other downstream 907864 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 975844 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1938168 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 2083627 3931890 ~ 3957044 (+)
G214717 NA other downstream 2240607 4107582 ~ 4108280 (+)

Expression


Co-expression Network