Gene
RNA
| Item | Value |
|---|---|
| gene id | G212969 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 2963201 ~ 2966079 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU241563 | True | 343 | lncRNA | 0.40 | 2 | 2963201 | 2966079 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_02878198_02942065 | VPS13A | coding | upstream | 20466 | 2878198 ~ 2942735 (+) |
| CI01000050_02852118_02864754 | RNF122 | coding | upstream | 98304 | 2852118 ~ 2865822 (+) |
| CI01000050_02833976_02838912 | NA | coding | upstream | 123717 | 2833888 ~ 2839484 (+) |
| CI01000050_02814263_02825948 | POLR3D | coding | upstream | 137048 | 2814263 ~ 2826153 (+) |
| CI01000050_02778979_02781848 | NA | coding | upstream | 180556 | 2778979 ~ 2782645 (+) |
| CI01000050_02978801_02980782 | CEP78 | coding | downstream | 12722 | 2978801 ~ 2980782 (+) |
| CI01000050_02995539_03115563 | CABIN1 | coding | downstream | 29460 | 2995539 ~ 3116078 (+) |
| CI01000050_03129712_03134758 | TBX16 | coding | downstream | 163633 | 3129712 ~ 3134963 (+) |
| CI01000050_03224108_03230670 | NA | coding | downstream | 257978 | 3224057 ~ 3231161 (+) |
| CI01000050_03238081_03239214 | NPY8BR | coding | downstream | 271638 | 3237717 ~ 3239314 (+) |
| G212950 | NA | non-coding | upstream | 92038 | 2870899 ~ 2871163 (+) |
| G212948 | NA | non-coding | upstream | 94406 | 2868565 ~ 2868795 (+) |
| G212943 | NA | non-coding | upstream | 132206 | 2829560 ~ 2830995 (+) |
| G212934 | NA | non-coding | upstream | 154284 | 2808560 ~ 2808917 (+) |
| G212933 | NA | non-coding | upstream | 158890 | 2803992 ~ 2804311 (+) |
| G212970 | NA | non-coding | downstream | 11130 | 2977209 ~ 2977436 (+) |
| G212973 | NA | non-coding | downstream | 28306 | 2994385 ~ 2994674 (+) |
| G212980 | NA | non-coding | downstream | 192047 | 3158126 ~ 3158455 (+) |
| G212985 | NA | non-coding | downstream | 201688 | 3167767 ~ 3168197 (+) |
| G212986 | NA | non-coding | downstream | 206545 | 3172624 ~ 3172954 (+) |
| G212927 | NA | other | upstream | 188068 | 2774839 ~ 2775133 (+) |
| CI01000050_01691894_01697791 | SULT1ST2, SULT1ST3 | other | upstream | 1265793 | 1691374 ~ 1698973 (+) |
| CI01000050_01296683_01297763 | SELENOK | other | upstream | 1663595 | 1296365 ~ 1298255 (+) |
| G212184 | NA | other | upstream | 2528995 | 433684 ~ 434206 (+) |
| CI01000050_03807697_03808793 | CLCN5B, CLCN5 | other | downstream | 839064 | 3805143 ~ 3808870 (+) |
| CI01000050_03938328_03956122 | RHOBTB2 | other | downstream | 984523 | 3931890 ~ 3957044 (+) |
| G214717 | NA | other | downstream | 1141503 | 4107582 ~ 4108280 (+) |
| CI01000050_04591548_04592778 | NA | other | downstream | 1625476 | 4589926 ~ 4593049 (+) |
| CI01000050_05407682_05409108 | FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A | other | downstream | 2441506 | 5407585 ~ 5409417 (+) |
