Gene
RNA
| Item | Value |
|---|---|
| gene id | G212985 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 3167767 ~ 3168197 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU241598 | True | 431 | lncRNA | 0.46 | 1 | 3167767 | 3168197 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_03129712_03134758 | TBX16 | coding | upstream | 32804 | 3129712 ~ 3134963 (+) |
| CI01000050_02995539_03115563 | CABIN1 | coding | upstream | 51689 | 2995539 ~ 3116078 (+) |
| CI01000050_02978801_02980782 | CEP78 | coding | upstream | 186985 | 2978801 ~ 2980782 (+) |
| CI01000050_02878198_02942065 | VPS13A | coding | upstream | 225032 | 2878198 ~ 2942735 (+) |
| CI01000050_02852118_02864754 | RNF122 | coding | upstream | 302870 | 2852118 ~ 2865822 (+) |
| CI01000050_03224108_03230670 | NA | coding | downstream | 55860 | 3224057 ~ 3231161 (+) |
| CI01000050_03238081_03239214 | NPY8BR | coding | downstream | 69520 | 3237717 ~ 3239314 (+) |
| CI01000050_03272821_03284544 | KCTD9, KCTD9A | coding | downstream | 104022 | 3272219 ~ 3284762 (+) |
| CI01000050_03306831_03324064 | NA | coding | downstream | 138634 | 3306831 ~ 3324244 (+) |
| CI01000050_03392003_03421994 | FGFR1A, FGFR1 | coding | downstream | 223806 | 3392003 ~ 3422913 (+) |
| G212980 | NA | non-coding | upstream | 9312 | 3158126 ~ 3158455 (+) |
| G212973 | NA | non-coding | upstream | 173093 | 2994385 ~ 2994674 (+) |
| G212970 | NA | non-coding | upstream | 190331 | 2977209 ~ 2977436 (+) |
| G212969 | NA | non-coding | upstream | 201688 | 2963201 ~ 2966079 (+) |
| G212950 | NA | non-coding | upstream | 296604 | 2870899 ~ 2871163 (+) |
| G212986 | NA | non-coding | downstream | 4427 | 3172624 ~ 3172954 (+) |
| G212988 | NA | non-coding | downstream | 6507 | 3174704 ~ 3174999 (+) |
| G213000 | NA | non-coding | downstream | 22322 | 3190519 ~ 3190739 (+) |
| G213016 | NA | non-coding | downstream | 31589 | 3199786 ~ 3201642 (+) |
| G213019 | NA | non-coding | downstream | 43387 | 3211584 ~ 3211854 (+) |
| G212927 | NA | other | upstream | 392634 | 2774839 ~ 2775133 (+) |
| CI01000050_01691894_01697791 | SULT1ST2, SULT1ST3 | other | upstream | 1470359 | 1691374 ~ 1698973 (+) |
| CI01000050_01296683_01297763 | SELENOK | other | upstream | 1868161 | 1296365 ~ 1298255 (+) |
| G212184 | NA | other | upstream | 2733561 | 433684 ~ 434206 (+) |
| CI01000050_03807697_03808793 | CLCN5B, CLCN5 | other | downstream | 636946 | 3805143 ~ 3808870 (+) |
| CI01000050_03938328_03956122 | RHOBTB2 | other | downstream | 782405 | 3931890 ~ 3957044 (+) |
| G214717 | NA | other | downstream | 939385 | 4107582 ~ 4108280 (+) |
| CI01000050_04591548_04592778 | NA | other | downstream | 1423358 | 4589926 ~ 4593049 (+) |
| CI01000050_05407682_05409108 | FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A | other | downstream | 2239388 | 5407585 ~ 5409417 (+) |
