Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007258875.3 |
| length | 3756 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 7 |
| gene id | tbx2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 24486822 ~ 24495457 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0042074 | cell migration involved in gastrulation | biological_process |
| GO:0021538 | epithalamus development | biological_process |
| GO:0046548 | retinal rod cell development | biological_process |
| GO:0046549 | retinal cone cell development | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0003205 | cardiac chamber development | biological_process |
| GO:0048318 | axial mesoderm development | biological_process |
| GO:0043704 | photoreceptor cell fate specification | biological_process |
| GO:0008283 | cell population proliferation | biological_process |
| GO:0008016 | regulation of heart contraction | biological_process |
| GO:0030903 | notochord development | biological_process |
| GO:0001947 | heart looping | biological_process |
| GO:0007155 | cell adhesion | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K10176 | TBX2; T-box protein 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17692 | lncRNA | upstream | 88170 | 24393299 ~ 24398652 (+) | True | G13167 |
| TU17682 | lncRNA | upstream | 131852 | 24345710 ~ 24354970 (+) | False | G13159 |
| TU17684 | lncRNA | upstream | 131852 | 24354067 ~ 24354970 (+) | True | G13159 |
| TU17650 | lncRNA | upstream | 227405 | 24257714 ~ 24259417 (+) | True | G13142 |
| TU17647 | lncRNA | upstream | 234451 | 24249739 ~ 24252371 (+) | True | G13139 |
| TU17729 | lncRNA | downstream | 151826 | 24647283 ~ 24687751 (+) | True | G13197 |
| TU17748 | lncRNA | downstream | 217869 | 24713326 ~ 24713963 (+) | True | G13212 |
| TU17750 | lncRNA | downstream | 228381 | 24723838 ~ 24726166 (+) | True | G13214 |
| TU18076 | lncRNA | downstream | 537444 | 25032901 ~ 25033376 (+) | True | G13455 |
| TU18079 | lncRNA | downstream | 551881 | 25047338 ~ 25049073 (+) | True | G13458 |
| XM_022675283.1 | mRNA | upstream | 13276 | 23949391 ~ 24473546 (+) | True | bcas3 |
| XM_022675286.1 | mRNA | upstream | 13276 | 23949391 ~ 24473546 (+) | False | bcas3 |
| XM_022675293.1 | mRNA | upstream | 13276 | 23949391 ~ 24473546 (+) | False | bcas3 |
| XM_022675301.1 | mRNA | upstream | 13276 | 23949391 ~ 24473546 (+) | False | bcas3 |
| XM_022675305.1 | mRNA | upstream | 248091 | 23949391 ~ 24238731 (+) | False | bcas3 |
| XM_022675350.1 | mRNA | downstream | 23705 | 24519162 ~ 24558604 (+) | True | tbx4 |
| XM_022675359.1 | mRNA | downstream | 205385 | 24700842 ~ 24722676 (+) | True | ccdc9 |
| XM_022677946.1 | mRNA | downstream | 243434 | 24738891 ~ 24776461 (+) | True | kiaa0753 |
| XM_022675363.1 | mRNA | downstream | 293819 | 24789276 ~ 24873126 (+) | True | LOC103028424 |
| XM_007236783.3 | mRNA | downstream | 484738 | 24980195 ~ 24982031 (+) | True | LOC103027752 |
| TU17542 | other | upstream | 631469 | 23853998 ~ 23855353 (+) | True | G13067 |
| TU16886 | other | upstream | 1974186 | 22473652 ~ 22512636 (+) | False | oaf |
| TU16874 | other | upstream | 2101850 | 22329719 ~ 22384972 (+) | False | spa17 |
| TU16873 | other | upstream | 2145309 | 22329719 ~ 22341513 (+) | False | spa17 |
| TU16611 | other | upstream | 3023173 | 21459850 ~ 21463649 (+) | True | G12362 |
| TU17745 | other | downstream | 218894 | 24714351 ~ 24717226 (+) | False | ccdc9 |
| TU17747 | other | downstream | 220433 | 24715890 ~ 24717226 (+) | False | ccdc9 |
| TU17784 | other | downstream | 360476 | 24855933 ~ 24857022 (+) | True | G13237 |
| TU18064 | other | downstream | 557056 | 25052513 ~ 25056103 (+) | True | G13445 |
| TU18257 | other | downstream | 1173291 | 25668748 ~ 25673189 (+) | False | mfrp |
