RNA id: TCONS_00012374



Basic Information


Item Value
RNA id TCONS_00012374
length 346
RNA type processed_transcript
GC content 0.48
exon number 2
gene id XLOC_006368
representative True

Chromosome Information


Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 2851139 ~ 2853078 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GTGCGAGCTTCGGGAGGATCGTGTGGGGAGGTAGGGCCACCTGTCTGCCAGCCAAACACTCATTGAGTATCTGGGGGACTCTGGTGGCCCAGCCATACCATACCAGGTTTCTCCCACACATCCAATTAACGCAGgagAAGGAATCCTGTTCAGCAAGAAGACAGGGATCGTTGTGAACTGGGATGGTGTGGAGAACTGCTGCCCTTTTCAGAGTGGAGGATGAGTGAAAACAAACCGAGTTCGTTACCCTGAAGCTAATCTATAAACCTAACCTAATGAGGATCGGGTTTTCTTTAGTAAACCCAGAGTTTCATTCACCCTTCTCttactttttaaagcaaaatat

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000143717

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00013455 lncRNA downstream 347963 2502083 ~ 2503176 (-) True XLOC_006366
TCONS_00013454 lncRNA downstream 348116 2502083 ~ 2503023 (-) False XLOC_006366
TCONS_00012370 lncRNA downstream 500784 2349076 ~ 2350355 (-) True XLOC_006364
TCONS_00013453 lncRNA downstream 501764 2348562 ~ 2349375 (-) False XLOC_006364
TCONS_00013729 lncRNA downstream 1027158 1817090 ~ 1823981 (-) True XLOC_006357
TCONS_00013730 lncRNA upstream 46249 2899327 ~ 2908155 (-) True XLOC_006371
TCONS_00013456 lncRNA upstream 66220 2919298 ~ 2924124 (-) True XLOC_006372
TCONS_00013731 lncRNA upstream 1107019 3960097 ~ 3961271 (-) True XLOC_006382
TCONS_00013732 lncRNA upstream 1552214 4405292 ~ 4407072 (-) True XLOC_006388
TCONS_00013733 lncRNA upstream 1554779 4407857 ~ 4408486 (-) True XLOC_006389
TCONS_00012373 mRNA downstream 330208 2515900 ~ 2520931 (-) True XLOC_006367
TCONS_00012372 mRNA downstream 410508 2439337 ~ 2440631 (-) True XLOC_006365
TCONS_00012371 mRNA downstream 410517 2426993 ~ 2440622 (-) False XLOC_006365
TCONS_00012369 mRNA downstream 514555 2315110 ~ 2336584 (-) True XLOC_006363
TCONS_00012368 mRNA downstream 567963 2254238 ~ 2283176 (-) True XLOC_006362
TCONS_00012377 mRNA upstream 74559 2927637 ~ 2981472 (-) True XLOC_006373
TCONS_00012379 mRNA upstream 255986 3109064 ~ 3155244 (-) False XLOC_006375
TCONS_00012380 mRNA upstream 272487 3125565 ~ 3155243 (-) True XLOC_006375
TCONS_00012382 mRNA upstream 410775 3263853 ~ 3324773 (-) False XLOC_006377
TCONS_00012383 mRNA upstream 411564 3264642 ~ 3324764 (-) True XLOC_006377
TCONS_00012358 other downstream 1436334 1409786 ~ 1414805 (-) False XLOC_006356
TCONS_00012343 other downstream 2024914 825904 ~ 826225 (-) True XLOC_006338
TCONS_00012338 other downstream 2297106 533165 ~ 554033 (-) True XLOC_006335
TCONS_00012375 other upstream 1247 2854325 ~ 2856272 (-) True XLOC_006369
TCONS_00012376 other upstream 4383 2857461 ~ 2859411 (-) True XLOC_006370
TCONS_00012378 other upstream 201745 3054823 ~ 3054937 (-) True XLOC_006374
TCONS_00012381 other upstream 345360 3198438 ~ 3243258 (-) True XLOC_006376
TCONS_00012394 other upstream 1365251 4218329 ~ 4223955 (-) False XLOC_006384

Expression Profile


//