RNA id: TCONS_00013038


Basic Information

Item Value
RNA id TCONS_00013038
length 116
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_006775
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 35370569 ~ 35370684 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCCATAGTCATATCACCTTCCAGCCCAAGTccggttacttactgaagctaagcagggctgagcctggtgcatccctggatgggagaccacaatggaaaactaggttgctgttagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000178533

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013869 lncRNA downstream 81132 35205297 ~ 35289437 (-) False XLOC_006774
TCONS_00013868 lncRNA downstream 81194 35205297 ~ 35289375 (-) False XLOC_006774
TCONS_00013871 lncRNA downstream 81342 35277858 ~ 35289227 (-) True XLOC_006774
TCONS_00013870 lncRNA downstream 81459 35248697 ~ 35289110 (-) False XLOC_006774
TCONS_00013867 lncRNA downstream 81470 35205297 ~ 35289099 (-) False XLOC_006774
TCONS_00013044 lncRNA upstream 150290 35520974 ~ 35527405 (-) True XLOC_006778
TCONS_00013872 lncRNA upstream 554358 35925042 ~ 35925484 (-) True XLOC_006784
TCONS_00013080 lncRNA upstream 950680 36321364 ~ 36322604 (-) False XLOC_006796
TCONS_00013088 lncRNA upstream 1159546 36530230 ~ 36535072 (-) False XLOC_006800
TCONS_00013091 lncRNA upstream 1160876 36531560 ~ 36532726 (-) False XLOC_006800
TCONS_00013035 mRNA downstream 318672 35041892 ~ 35051897 (-) True XLOC_006772
TCONS_00013033 mRNA downstream 508085 34804877 ~ 34862484 (-) False XLOC_006771
TCONS_00013034 mRNA downstream 508117 34854921 ~ 34862452 (-) True XLOC_006771
TCONS_00013032 mRNA downstream 512069 34804243 ~ 34858500 (-) False XLOC_006771
TCONS_00013031 mRNA downstream 577082 34765145 ~ 34793487 (-) True XLOC_006770
TCONS_00013039 mRNA upstream 20925 35391609 ~ 35459928 (-) False XLOC_006776
TCONS_00013040 mRNA upstream 20926 35391610 ~ 35472531 (-) False XLOC_006776
TCONS_00013042 mRNA upstream 113545 35484229 ~ 35497586 (-) True XLOC_006777
TCONS_00013043 mRNA upstream 140209 35510893 ~ 35527697 (-) False XLOC_006778
TCONS_00013046 mRNA upstream 380006 35750690 ~ 35765028 (-) False XLOC_006780
TCONS_00013037 other downstream 148956 35206835 ~ 35221613 (-) False XLOC_006774
TCONS_00013036 other downstream 175810 35182994 ~ 35194759 (-) True XLOC_006773
TCONS_00013029 other downstream 726288 34644150 ~ 34644281 (-) True XLOC_006769
TCONS_00013028 other downstream 731823 34638629 ~ 34638746 (-) True XLOC_006768
TCONS_00013017 other downstream 1708216 33659708 ~ 33662353 (-) False XLOC_006761
TCONS_00013041 other upstream 59860 35430544 ~ 35459931 (-) True XLOC_006776
TCONS_00013045 other upstream 221558 35592242 ~ 35592377 (-) True XLOC_006779
TCONS_00013051 other upstream 455983 35826667 ~ 35842589 (-) True XLOC_006781
TCONS_00013058 other upstream 591666 35962350 ~ 35962466 (-) True XLOC_006785
TCONS_00013072 other upstream 764732 36135416 ~ 36141351 (-) True XLOC_006792