Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000004_07962260_07967751.mRNA |
| length | 1563 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 5 |
| gene id | CI01000004_07962260_07967751 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 7962260 ~ 7968607 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0008021 | synaptic vesicle | cellular_component |
| id | description |
|---|---|
| K07882 | RAB3A; Ras-related protein Rab-3A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32553 | lncRNA | upstream | 134578 | 7827368 ~ 7827682 (+) | True | G28791 |
| TU32552 | lncRNA | upstream | 140243 | 7821817 ~ 7822017 (+) | True | G28790 |
| TU32546 | lncRNA | upstream | 157607 | 7804266 ~ 7804653 (+) | True | G28784 |
| TU32542 | lncRNA | upstream | 195871 | 7765563 ~ 7766389 (+) | True | G28780 |
| TU32541 | lncRNA | upstream | 197549 | 7764512 ~ 7764711 (+) | True | G28779 |
| TU32559 | lncRNA | downstream | 14874 | 7983481 ~ 7983777 (+) | True | G28797 |
| TU32562 | lncRNA | downstream | 56884 | 8025491 ~ 8025898 (+) | True | G28800 |
| TU32563 | lncRNA | downstream | 59643 | 8028250 ~ 8033712 (+) | False | G28801 |
| TU32564 | lncRNA | downstream | 59643 | 8028250 ~ 8032070 (+) | True | G28801 |
| TU32591 | lncRNA | downstream | 308595 | 8277202 ~ 8284097 (+) | True | G28819 |
| CI01000004_07954612_07959231.mRNA | mRNA | upstream | 2534 | 7954236 ~ 7959726 (+) | True | CI01000004_07954612_07959231 |
| CI01000004_07945349_07952716.mRNA | mRNA | upstream | 9544 | 7945056 ~ 7952716 (+) | True | CI01000004_07945349_07952716 |
| CI01000004_07911608_07916117.mRNA | mRNA | upstream | 46105 | 7911608 ~ 7916155 (+) | True | CI01000004_07911608_07916117 |
| CI01000004_07907663_07910335.mRNA | mRNA | upstream | 51782 | 7907663 ~ 7910478 (+) | True | CI01000004_07907663_07910335 |
| CI01000004_07903583_07906667.mRNA | mRNA | upstream | 55590 | 7903583 ~ 7906670 (+) | True | CI01000004_07903583_07906667 |
| CI01000004_07971396_07974484.mRNA | mRNA | downstream | 2717 | 7971324 ~ 7974503 (+) | True | CI01000004_07971396_07974484 |
| CI01000004_07987968_07989044.mRNA | mRNA | downstream | 16760 | 7985367 ~ 7989529 (+) | True | CI01000004_07987968_07989044 |
| CI01000004_07993172_07997413.mRNA | mRNA | downstream | 24565 | 7993172 ~ 7997413 (+) | True | CI01000004_07993172_07997413 |
| CI01000004_08015521_08017006.mRNA | mRNA | downstream | 46690 | 8015297 ~ 8017014 (+) | True | CI01000004_08015521_08017006 |
| CI01000004_08081989_08097935.mRNA | mRNA | downstream | 113097 | 8081704 ~ 8098754 (+) | True | CI01000004_08081989_08097935 |
| TU32454 | other | upstream | 305877 | 7654772 ~ 7654879 (+) | True | G28706 |
| TU32079 | other | upstream | 1387839 | 6572819 ~ 6574421 (+) | True | G28354 |
| TU32005 | other | upstream | 1460173 | 6470028 ~ 6502087 (+) | True | G28302 |
| TU31830 | other | upstream | 2229259 | 5732589 ~ 5733001 (+) | True | G28165 |
| TU31418 | other | upstream | 2588457 | 5372825 ~ 5373803 (+) | True | G27805 |
| TU32590 | other | downstream | 465098 | 8439958 ~ 8451227 (+) | True | G28818 |
| TU32637 | other | downstream | 630628 | 8599235 ~ 8599603 (+) | True | G28859 |
| TU32792 | other | downstream | 1007831 | 8976438 ~ 8980984 (+) | False | CI01000004_08976512_08980033 |
| TU32793 | other | downstream | 1007831 | 8976438 ~ 8980984 (+) | True | CI01000004_08976512_08980033 |
| TU34813 | other | downstream | 2528769 | 10497376 ~ 10497788 (+) | True | G30797 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00030910 | True | 2408 | mRNA | 0.38 | 5 | NC_007113.7 | 24868010 ~ 24878659 (+) |
