RNA id: TU174896


Basic Information

Item Value
RNA id TU174896
length 393
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G154017
representative True

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 3574064 ~ 3574456 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGTCTATCTATCTATCTGTCTGTCTGTCTGTCTGTCTATCTGTCTATCTATCATCTAACATTCTATCTATCTATCTATCTATCTATATATCTATCTATCTGTCTGTCTATCTCTGTCTGTCTGTCTGTCTATCTATCTGTCTGTCTGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTATCTATCTATCTGTCTGTTTGTCTGTCTGTCTGTCTATCTATCTATCTATCTATATATCTCTGTCTGTCTGTCTGTCTATCTATCTCTATCTGTCTGTCTGTCTGTCTGTCTATCTATCTATCTATCTATCATCTAACATTCTATCTATCTATCTATCTATCTATCTATCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU174830 lncRNA downstream 215709 3348381 ~ 3358355 (-) True G153952
TU174864 lncRNA downstream 263083 3310710 ~ 3310981 (-) True G153985
TU174171 lncRNA downstream 524735 3049059 ~ 3049329 (-) True G153373
TU174126 lncRNA downstream 659833 2912932 ~ 2914231 (-) True G153333
TU174089 lncRNA downstream 698268 2875591 ~ 2875796 (-) True G153299
TU174924 lncRNA upstream 59529 3633985 ~ 3634543 (-) True G154040
TU174930 lncRNA upstream 113396 3687852 ~ 3688128 (-) True G154046
TU174931 lncRNA upstream 113771 3688227 ~ 3688470 (-) True G154047
TU174941 lncRNA upstream 161775 3736231 ~ 3740719 (-) True G154057
TU175024 lncRNA upstream 427720 4002176 ~ 4002475 (-) True G154137
CI01000029_03534096_03563671.mRNA mRNA downstream 10393 3534052 ~ 3563671 (-) True CI01000029_03534096_03563671
CI01000029_03503783_03509429.mRNA mRNA downstream 64635 3503663 ~ 3509429 (-) True CI01000029_03503783_03509429
CI01000029_03397097_03444565.mRNA mRNA downstream 129499 3396139 ~ 3444565 (-) True CI01000029_03397097_03444565
CI01000029_03382508_03395312.mRNA mRNA downstream 178752 3382350 ~ 3395312 (-) True CI01000029_03382508_03395312
CI01000029_02957572_02962601.mRNA mRNA downstream 610710 2957427 ~ 2963354 (-) True CI01000029_02957572_02962601
CI01000029_03590053_03594170.mRNA mRNA upstream 15197 3589653 ~ 3594904 (-) True CI01000029_03590053_03594170
CI01000029_03625037_03636215.mRNA mRNA upstream 50248 3624704 ~ 3637033 (-) True CI01000029_03625037_03636215
CI01000029_03698769_03707177.mRNA mRNA upstream 124116 3698572 ~ 3707883 (-) False CI01000029_03698769_03707177
CI01000029_03723621_03726874.mRNA mRNA upstream 148731 3723187 ~ 3727070 (-) True CI01000029_03723621_03726874
CI01000029_03746973_03752660.mRNA mRNA upstream 172480 3746936 ~ 3752660 (-) True CI01000029_03746973_03752660
TU174756 other downstream 287510 3248777 ~ 3286554 (-) True G153891
TU173923 other downstream 981262 2592459 ~ 2592802 (-) True G153138
TU173481 other downstream 2279941 1292249 ~ 1294123 (-) True CI01000029_01293143_01293964
TU174823 other upstream 131767 3706223 ~ 3707252 (-) True CI01000029_03698769_03707177
TU175091 other upstream 885887 4472400 ~ 4477212 (-) True G154201
TU175317 other upstream 1411652 4986108 ~ 4987425 (-) False G154415
TU175314 other upstream 1411729 4986185 ~ 4987425 (-) True G154415
TU177741 other upstream 3595911 7170367 ~ 7170951 (-) False G156542

Expression Profile