RNA id: CI01000030_07788973_07791700.mRNA



Basic Information


Item Value
RNA id CI01000030_07788973_07791700.mRNA
length 1137
RNA type mRNA
GC content 0.40
exon number 4
gene id CI01000030_07788973_07791700
representative False

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 7788797 ~ 7792198 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACAAACGTTGTAAGACATTATGATGATGTTAGCTGTATTAGCATGAAAGCTACATCAATTTAGACAATTGGAAAATAAAATAATTAAACTGAATGTTATTAAATAATAACAATACTTATGTAAAATCTTTTTAGTAATAAAATATAATAAAATGGACTCTTGTCACACAATCTGTATTGTTTTAAGATGCTACATGCTATTGCTGAAGTTAAAATCTCTGTTACATAAATTATTGTTCAAAATGTCAATTTTTAAAGAACGTAAAACAGAATTTATGATGGATTTGGTGTTTGACTTGGTGGGAAAGCACAGATCACAAATTTCCCATGTCATAAAAAGTAGCCATATTTTATTATGACTGACATTATCAGATTCATGATACCAATATGTAAATATTTAACAGTATGAGTCAAATAACCGGTTGTTCTTTTGTCCTTCAAAGCTGTACGTCTGTCCCAAGTGTGACCCGACCAGGAGGAGAATGTTCTGCGGCCCATGATGGGCGGCAGCGGGTCTAAAGGTAAAGGGTACTGGCCGTTCTCTGGTTCGGGTAGCGGGGATGAACCTGCCAAAGACGGCCAAGAGCAGAGCCTGGCCAGGGTACGGAGCATTCGAAATGCGACGCCTTTCGTGTTTACCAGGAGGAGCTCTTTGTACTTCGATGAGGACGGTGACCTGGCCCATGAGTTTTATGAAGAAACGGTAGTAACGAAAAACGGCCGTAAGAAAGCCAAACTAAAACGAATCCACAAGAATCTCATACCTCAGCACATCATGAAGGACTTTGGAGGACCTTCTAGAACGTTCTGTTTAGAATTCCGAAGAAGTTCTAGAAGCCCTCAGAAAGATCAGGTTGCATTTGAATGCTTTAATCAGCGGACATTGTATAACAAGCAGAGCTTCGCAGATCGTCAGGATGCGATGTTCGTAGAGCCAGTAGGAGATAATCAATGGCTGTTTACTACGCTGTGATTTGTTTGTATGCTGATTGGATGATGGAATTGCTGCCGCTCCTTGATTGGACAGTTGAGGCACTGACTGACACAGTTATGACAGTCACTGTGAGAAGCCCCGCCCCCCCCTCACTGTTGTGGCAGTCTTTATTTATTACAGTTGAAATGACCAGTTGGCATTAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU185687 lncRNA downstream 7256 7781244 ~ 7781552 (-) True G163439
TU185683 lncRNA downstream 61405 7727193 ~ 7727403 (-) True G163435
TU185681 lncRNA downstream 85099 7703408 ~ 7703709 (-) True G163433
TU185664 lncRNA downstream 133194 7655039 ~ 7655614 (-) True G163416
TU185663 lncRNA downstream 135830 7652602 ~ 7652978 (-) True G163415
TU185691 lncRNA upstream 9934 7802132 ~ 7802579 (-) True CI01000030_07802211_07804196
TU185693 lncRNA upstream 37493 7829691 ~ 7830162 (-) False G163445
TU185694 lncRNA upstream 37493 7829691 ~ 7830607 (-) True G163445
TU185697 lncRNA upstream 51614 7843812 ~ 7844268 (-) True G163448
TU185698 lncRNA upstream 52822 7845020 ~ 7845475 (-) True G163449
CI01000030_07769918_07776928.mRNA mRNA downstream 11880 7768948 ~ 7776928 (-) True CI01000030_07769918_07776928
CI01000030_07761302_07764226.mRNA mRNA downstream 24582 7761302 ~ 7764226 (-) True CI01000030_07761302_07764226
CI01000030_07749038_07754607.mRNA mRNA downstream 34201 7748786 ~ 7754607 (-) True CI01000030_07749038_07754607
CI01000030_07736031_07737720.mRNA mRNA downstream 51088 7735746 ~ 7737720 (-) False CI01000030_07736031_07737720
CI01000030_07726597_07733277.mRNA mRNA downstream 54219 7726389 ~ 7734589 (-) True CI01000030_07726597_07733277
CI01000030_07794056_07801708.mRNA mRNA upstream 1473 7793671 ~ 7801708 (-) True CI01000030_07794056_07801708
CI01000030_07802211_07804196.mRNA mRNA upstream 9851 7802049 ~ 7804223 (-) False CI01000030_07802211_07804196
CI01000030_07810359_07822361.mRNA mRNA upstream 18161 7810359 ~ 7822361 (-) True CI01000030_07810359_07822361
CI01000030_07889005_07897250.mRNA mRNA upstream 96133 7888331 ~ 7897250 (-) True CI01000030_07889005_07897250
CI01000030_07901178_07901441.mRNA mRNA upstream 108392 7900590 ~ 7901441 (-) True CI01000030_07901178_07901441
TU185612 other downstream 50804 7737975 ~ 7738004 (-) True G163364
TU185332 other downstream 638664 7149474 ~ 7150144 (-) True G163139
TU185223 other downstream 863151 6924483 ~ 6925657 (-) True G163065
TU183403 other downstream 1036397 6743298 ~ 6745350 (-) True G161515
TU183402 other downstream 1036492 6743298 ~ 6745350 (-) False G161515
TU185749 other upstream 399721 8192404 ~ 8192486 (-) True G163498
TU186160 other upstream 1141215 8933413 ~ 8933982 (-) True G163873
TU185995 other upstream 1495008 9287206 ~ 9302149 (-) True G163710
TU186385 other upstream 1682990 9475188 ~ 9476264 (-) True G164071
TU186002 other upstream 2323317 10121592 ~ 10121720 (-) True G163717

Expression Profile