RNA id: TU522093


Basic Information

Item Value
RNA id TU522093
length 300
lncRNA type inter_gene
GC content 0.18
exon number 1
gene id G454733
representative True

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 1442144 ~ 1442443 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAAATAAGCTTACAATACAAGTGTGACTTTTTTCCCAGGACCATTTAACCTTTTCGAATCCTGTCCATAAATTTTTTTTTTTTTTTTTTTTTGGGTGGGTGGGGGTGTTCACATAGTGAGTGCCAAAAACGCTACAAGTTTCTGATGAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU522073 lncRNA downstream 151 1434840 ~ 1441993 (-) False G454721
TU522072 lncRNA downstream 3212 1436667 ~ 1438932 (-) True G454721
TU522076 lncRNA downstream 45530 1396382 ~ 1396614 (-) True G454722
TU522053 lncRNA downstream 54943 1362758 ~ 1387201 (-) False G454707
TU522098 lncRNA upstream 15301 1457744 ~ 1462005 (-) True G454738
TU522122 lncRNA upstream 80467 1522910 ~ 1523116 (-) True G454760
TU522126 lncRNA upstream 82044 1524487 ~ 1524770 (-) True G454761
TU522134 lncRNA upstream 88678 1531121 ~ 1532421 (-) True G454763
TU522151 lncRNA upstream 119219 1561662 ~ 1566311 (-) True G454780
CI01000320_01426753_01430603.mRNA mRNA downstream 11490 1426176 ~ 1430654 (-) False CI01000320_01426753_01430603
CI01000320_01394827_01394991.mRNA mRNA downstream 46045 1394798 ~ 1396099 (-) True CI01000320_01394827_01394991
CI01000320_01345762_01346867.mRNA mRNA downstream 95277 1345662 ~ 1346867 (-) True CI01000320_01345762_01346867
CI01000320_01338270_01341123.mRNA mRNA downstream 98870 1337537 ~ 1343274 (-) False CI01000320_01338270_01341123
CI01000320_01328278_01333798.mRNA mRNA downstream 108346 1328250 ~ 1333798 (-) True CI01000320_01328278_01333798
CI01000320_01453536_01456193.mRNA mRNA upstream 10713 1453156 ~ 1456277 (-) True CI01000320_01453536_01456193
CI01000320_01719471_01731780.mRNA mRNA upstream 276863 1719306 ~ 1731876 (-) True CI01000320_01719471_01731780
CI01000320_01896359_01898516.mRNA mRNA upstream 453381 1895824 ~ 1898516 (-) True CI01000320_01896359_01898516
CI01000320_01914015_01916289.mRNA mRNA upstream 470861 1913304 ~ 1916289 (-) False CI01000320_01914015_01916289
CI01000320_01996579_02046284.mRNA mRNA upstream 553915 1996358 ~ 2046284 (-) True CI01000320_01996579_02046284
TU522089 other downstream 11491 1426783 ~ 1430653 (-) False CI01000320_01426753_01430603
TU522090 other downstream 11491 1426783 ~ 1430653 (-) False CI01000320_01426753_01430603
TU522091 other downstream 11491 1426783 ~ 1430653 (-) True CI01000320_01426753_01430603
TU521994 other downstream 100928 1336279 ~ 1341216 (-) True CI01000320_01338270_01341123
TU522025 other downstream 300264 1141242 ~ 1141880 (-) True G454686
TU523828 other upstream 2200794 3643237 ~ 3648040 (-) False G456317
TU523830 other upstream 2200794 3643237 ~ 3648040 (-) True G456317

Expression Profile