Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00034827 |
| length | 1036 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 4 |
| gene id | XLOC_017526 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 38257766 ~ 38291952 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0043547 | positive regulation of GTPase activity | biological_process |
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0002548 | monocyte chemotaxis | biological_process |
| GO:0006935 | chemotaxis | biological_process |
| GO:0006954 | inflammatory response | biological_process |
| GO:0006955 | immune response | biological_process |
| GO:0071346 | cellular response to interferon-gamma | biological_process |
| GO:0071347 | cellular response to interleukin-1 | biological_process |
| GO:0071356 | cellular response to tumor necrosis factor | biological_process |
| GO:0048247 | lymphocyte chemotaxis | biological_process |
| GO:0070098 | chemokine-mediated signaling pathway | biological_process |
| GO:0070374 | positive regulation of ERK1 and ERK2 cascade | biological_process |
| GO:0030593 | neutrophil chemotaxis | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005125 | cytokine activity | molecular_function |
| GO:0048020 | CCR chemokine receptor binding | molecular_function |
| GO:0008009 | chemokine activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041014-165 | Predicted to enable CCR chemokine receptor binding activity and chemokine activity. Predicted to be involved in several processes, including cellular response to cytokine stimulus; leukocyte chemotaxis; and positive regulation of ERK1 and ERK2 cascade. Predicted to act upstream of or within chemotaxis; immune response; and response to virus. Predicted to be located in extracellular region. Predicted to be active in extracellular space. |
| ensembl_id | ENSDART00000147485 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00036641 | lncRNA | upstream | 119343 | 38128054 ~ 38138423 (+) | False | XLOC_017524 |
| TCONS_00036642 | lncRNA | upstream | 119343 | 38130452 ~ 38138423 (+) | False | XLOC_017524 |
| TCONS_00036406 | lncRNA | upstream | 121025 | 38131736 ~ 38136741 (+) | True | XLOC_017524 |
| TCONS_00034820 | lncRNA | upstream | 372960 | 37866623 ~ 37884806 (+) | False | XLOC_017522 |
| TCONS_00036405 | lncRNA | upstream | 415760 | 37836126 ~ 37842006 (+) | False | XLOC_017520 |
| TCONS_00036643 | lncRNA | downstream | 96088 | 38373672 ~ 38447247 (+) | True | XLOC_017530 |
| TCONS_00036644 | lncRNA | downstream | 312924 | 38590508 ~ 38598879 (+) | True | XLOC_017534 |
| TCONS_00036645 | lncRNA | downstream | 770475 | 39048059 ~ 39053466 (+) | False | XLOC_017541 |
| TCONS_00036646 | lncRNA | downstream | 770487 | 39048071 ~ 39059365 (+) | False | XLOC_017541 |
| TCONS_00034856 | lncRNA | downstream | 770530 | 39048114 ~ 39052699 (+) | False | XLOC_017541 |
| TCONS_00034826 | mRNA | upstream | 15907 | 38201644 ~ 38241859 (+) | True | XLOC_017525 |
| TCONS_00034824 | mRNA | upstream | 141219 | 38032143 ~ 38116547 (+) | False | XLOC_017523 |
| TCONS_00034823 | mRNA | upstream | 171045 | 38031439 ~ 38086721 (+) | False | XLOC_017523 |
| TCONS_00034819 | mRNA | upstream | 341244 | 37866171 ~ 37916522 (+) | False | XLOC_017522 |
| TCONS_00034830 | mRNA | downstream | 1939 | 38279523 ~ 38280392 (+) | True | XLOC_017527 |
| TCONS_00034831 | mRNA | downstream | 8087 | 38285671 ~ 38286553 (+) | True | XLOC_017528 |
| TCONS_00034832 | mRNA | downstream | 12352 | 38289936 ~ 38291773 (+) | True | XLOC_017526 |
| TCONS_00034833 | mRNA | downstream | 44860 | 38322444 ~ 38359320 (+) | False | XLOC_017529 |
| TCONS_00034834 | mRNA | downstream | 44860 | 38322444 ~ 38359333 (+) | False | XLOC_017529 |
| TCONS_00034825 | other | upstream | 137876 | 38113797 ~ 38119890 (+) | True | XLOC_017523 |
| TCONS_00034815 | other | upstream | 431630 | 37820990 ~ 37826136 (+) | False | XLOC_017519 |
| TCONS_00034779 | other | upstream | 1977602 | 36280048 ~ 36280164 (+) | True | XLOC_017499 |
| TCONS_00034762 | other | upstream | 2834939 | 35422698 ~ 35422827 (+) | True | XLOC_017490 |
| TCONS_00034760 | other | upstream | 2875149 | 35382438 ~ 35382617 (+) | False | XLOC_017489 |
| TCONS_00034845 | other | downstream | 343082 | 38620666 ~ 38648890 (+) | False | XLOC_017535 |
| TCONS_00034847 | other | downstream | 343150 | 38620734 ~ 38633460 (+) | True | XLOC_017535 |
| TCONS_00034852 | other | downstream | 497388 | 38774972 ~ 38775087 (+) | True | XLOC_017538 |
| TCONS_00034855 | other | downstream | 632657 | 38910241 ~ 39046180 (+) | True | XLOC_017540 |
| TCONS_00034862 | other | downstream | 1054385 | 39331969 ~ 39332092 (+) | True | XLOC_017544 |
