Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005690 |
| length | 679 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 4 |
| gene id | XLOC_001964 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 11926073 ~ 11927986 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0030154 | cell differentiation | biological_process |
| GO:0009888 | tissue development | biological_process |
| GO:0060429 | epithelium development | biological_process |
| GO:0048869 | cellular developmental process | biological_process |
| GO:0031099 | regeneration | biological_process |
| GO:0003002 | regionalization | biological_process |
| GO:0007389 | pattern specification process | biological_process |
| GO:0048699 | generation of neurons | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005835 | lncRNA | upstream | 260110 | 11652594 ~ 11665963 (+) | False | XLOC_001961 |
| TCONS_00005836 | lncRNA | upstream | 260110 | 11652749 ~ 11665963 (+) | True | XLOC_001961 |
| TCONS_00005688 | lncRNA | upstream | 407334 | 11513386 ~ 11518739 (+) | True | XLOC_001960 |
| TCONS_00005834 | lncRNA | upstream | 664187 | 11260154 ~ 11261886 (+) | False | XLOC_001955 |
| TCONS_00003828 | lncRNA | upstream | 938771 | 10980233 ~ 10987302 (+) | True | XLOC_001952 |
| TCONS_00005692 | lncRNA | downstream | 103 | 11928089 ~ 11929132 (+) | False | XLOC_001965 |
| TCONS_00005691 | lncRNA | downstream | 103 | 11928089 ~ 11929132 (+) | True | XLOC_001965 |
| TCONS_00005837 | lncRNA | downstream | 1370738 | 13298724 ~ 13304277 (+) | False | XLOC_001971 |
| TCONS_00005838 | lncRNA | downstream | 1370740 | 13298726 ~ 13304277 (+) | True | XLOC_001971 |
| TCONS_00005839 | lncRNA | downstream | 3096795 | 15024781 ~ 15031440 (+) | False | XLOC_001979 |
| TCONS_00003842 | mRNA | upstream | 137508 | 11767791 ~ 11788565 (+) | True | XLOC_001962 |
| TCONS_00003840 | mRNA | upstream | 424649 | 11398111 ~ 11501424 (+) | True | XLOC_001958 |
| TCONS_00003838 | mRNA | upstream | 553532 | 11355841 ~ 11372541 (+) | False | XLOC_001957 |
| TCONS_00003839 | mRNA | upstream | 557597 | 11355884 ~ 11368476 (+) | True | XLOC_001957 |
| TCONS_00003837 | mRNA | upstream | 615304 | 11309814 ~ 11310769 (+) | True | XLOC_001956 |
| TCONS_00003845 | mRNA | downstream | 589073 | 12517059 ~ 12730451 (+) | True | XLOC_001967 |
| TCONS_00003846 | mRNA | downstream | 1072384 | 13000370 ~ 13063743 (+) | False | XLOC_001968 |
| TCONS_00003847 | mRNA | downstream | 1072683 | 13000669 ~ 13038542 (+) | False | XLOC_001968 |
| TCONS_00003848 | mRNA | downstream | 1072718 | 13000704 ~ 13064110 (+) | True | XLOC_001968 |
| TCONS_00003849 | mRNA | downstream | 1281594 | 13209580 ~ 13236012 (+) | False | XLOC_001969 |
| TCONS_00003843 | other | upstream | 151554 | 11774405 ~ 11774519 (+) | True | XLOC_001963 |
| TCONS_00003841 | other | upstream | 427264 | 11498693 ~ 11498809 (+) | True | XLOC_001959 |
| TCONS_00003830 | other | upstream | 810103 | 11115854 ~ 11115970 (+) | True | XLOC_001954 |
| TCONS_00003827 | other | upstream | 938771 | 10972810 ~ 10987302 (+) | False | XLOC_001952 |
| TCONS_00003825 | other | upstream | 1102625 | 10822755 ~ 10823448 (+) | True | XLOC_001951 |
| TCONS_00003844 | other | downstream | 405267 | 12333253 ~ 12333369 (+) | True | XLOC_001966 |
| TCONS_00003853 | other | downstream | 1928806 | 13856792 ~ 13894856 (+) | True | XLOC_001972 |
| TCONS_00003854 | other | downstream | 2002862 | 13930848 ~ 13931718 (+) | True | XLOC_001973 |
| TCONS_00003873 | other | downstream | 3327196 | 15255182 ~ 15287900 (+) | False | XLOC_001989 |
| TCONS_00003878 | other | downstream | 3370804 | 15298790 ~ 15304367 (+) | True | XLOC_001989 |
