Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00045470 |
| length | 849 |
| RNA type | processed_transcript |
| GC content | 0.50 |
| exon number | 3 |
| gene id | XLOC_022869 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 17140938 ~ 17216312 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0060070 | canonical Wnt signaling pathway | biological_process |
| GO:0060729 | intestinal epithelial structure maintenance | biological_process |
| GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
| GO:0019725 | cellular homeostasis | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0031491 | nucleosome binding | molecular_function |
| GO:0042393 | histone binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041114-176 | Predicted to enable histone binding activity and nucleosome binding activity. Acts upstream of or within canonical Wnt signaling pathway and intestinal epithelial structure maintenance. Predicted to be active in nucleus. Is expressed in brain; hindbrain; intestine; and midbrain. Human ortholog(s) of this gene implicated in acute monocytic leukemia and acute myeloid leukemia. Orthologous to human MLLT10 (MLLT10 histone lysine methyltransferase DOT1L cofactor). |
| ensembl_id | ENSDART00000149879 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00045466 | lncRNA | upstream | 56 | 17200123 ~ 17209579 (+) | False | XLOC_022869 |
| TCONS_00046954 | lncRNA | upstream | 307774 | 16719606 ~ 16901861 (+) | False | XLOC_022863 |
| TCONS_00046953 | lncRNA | upstream | 307774 | 16719606 ~ 16901861 (+) | False | XLOC_022863 |
| TCONS_00045445 | lncRNA | upstream | 309423 | 16726748 ~ 16900212 (+) | True | XLOC_022863 |
| TCONS_00045438 | lncRNA | upstream | 1000635 | 16207562 ~ 16209000 (+) | False | XLOC_022861 |
| TCONS_00045472 | lncRNA | downstream | 41846 | 17256843 ~ 17259487 (+) | False | XLOC_022870 |
| TCONS_00045473 | lncRNA | downstream | 42803 | 17257800 ~ 17258655 (+) | True | XLOC_022870 |
| TCONS_00046803 | lncRNA | downstream | 65843 | 17280840 ~ 17282535 (+) | True | XLOC_022873 |
| TCONS_00045479 | lncRNA | downstream | 103524 | 17318521 ~ 17319849 (+) | True | XLOC_022874 |
| TCONS_00046959 | lncRNA | downstream | 107489 | 17322486 ~ 17325645 (+) | False | XLOC_022875 |
| TCONS_00045462 | mRNA | upstream | 28798 | 17145830 ~ 17180837 (+) | False | XLOC_022869 |
| TCONS_00045461 | mRNA | upstream | 28798 | 17145830 ~ 17180837 (+) | False | XLOC_022869 |
| TCONS_00045455 | mRNA | upstream | 81802 | 17068724 ~ 17127833 (+) | False | XLOC_022868 |
| TCONS_00045456 | mRNA | upstream | 82638 | 17069420 ~ 17126997 (+) | True | XLOC_022868 |
| TCONS_00045454 | mRNA | upstream | 185958 | 17007407 ~ 17023677 (+) | True | XLOC_022867 |
| TCONS_00045471 | mRNA | downstream | 41796 | 17256793 ~ 17259643 (+) | False | XLOC_022870 |
| TCONS_00045474 | mRNA | downstream | 45004 | 17260001 ~ 17267235 (+) | False | XLOC_022871 |
| TCONS_00045475 | mRNA | downstream | 45332 | 17260329 ~ 17267235 (+) | False | XLOC_022871 |
| TCONS_00045476 | mRNA | downstream | 47882 | 17262879 ~ 17263667 (+) | True | XLOC_022871 |
| TCONS_00045477 | mRNA | downstream | 54852 | 17269849 ~ 17276770 (+) | False | XLOC_022872 |
| TCONS_00045467 | other | upstream | 40 | 17200458 ~ 17209595 (+) | False | XLOC_022869 |
| TCONS_00045453 | other | upstream | 198553 | 17005678 ~ 17011082 (+) | False | XLOC_022867 |
| TCONS_00045449 | other | upstream | 224096 | 16983303 ~ 16985539 (+) | False | XLOC_022866 |
| TCONS_00045446 | other | upstream | 401987 | 16807521 ~ 16807648 (+) | True | XLOC_022864 |
| TCONS_00045443 | other | upstream | 659086 | 16393527 ~ 16550549 (+) | False | XLOC_022862 |
| TCONS_00045481 | other | downstream | 107647 | 17322644 ~ 17325645 (+) | False | XLOC_022875 |
| TCONS_00045482 | other | downstream | 119681 | 17334678 ~ 17337526 (+) | False | XLOC_022877 |
| TCONS_00045484 | other | downstream | 120521 | 17335518 ~ 17337959 (+) | True | XLOC_022877 |
| TCONS_00045488 | other | downstream | 523522 | 17738519 ~ 17738635 (+) | True | XLOC_022879 |
| TCONS_00045489 | other | downstream | 862546 | 18077543 ~ 18077659 (+) | True | XLOC_022880 |
