RNA id: TU2377357



Basic Information


Item Value
RNA id TU2377357
length 298
lncRNA type intronic
GC content 0.42
exon number 2
gene id G2079213
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37321569 ~ 37323327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtagaacaggtgtgtgtgtttatactgtccagtagaacaggtgtgtgtgtttatactgtccagtagaacaggtgtgtgtgtttatactgtctaccagaacaggtgtgtgtgtttatactgtctaccagaacaggtgtgtgtgtttatactgtctaccagaacaggtgtgtgtgtttatactgtctaccagaacaggtgtgtgtgtttaaactgtccagtagaacaggtgtgtgtgtttatactgtccaccagaacaggtgtgtgtgtttatactgttcagtagaacaggtgtgtgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2377348 lncRNA upstream 14383 37307295 ~ 37307932 (+) True G2079207
TU2377330 lncRNA upstream 43349 37277709 ~ 37278966 (+) False G2079194
TU2377331 lncRNA upstream 43349 37277709 ~ 37278966 (+) True G2079194
TU2377323 lncRNA upstream 63191 37257044 ~ 37259124 (+) True G2079188
TU2377298 lncRNA upstream 66002 37252761 ~ 37256313 (+) True G2079170
TU2377699 lncRNA downstream 37539 37360554 ~ 37360820 (+) True G2079457
TU2377700 lncRNA downstream 37924 37360939 ~ 37361300 (+) True G2079458
TU2377701 lncRNA downstream 38566 37361581 ~ 37361858 (+) True G2079459
TU2377705 lncRNA downstream 40262 37363277 ~ 37364384 (+) True G2079462
TU2377709 lncRNA downstream 42649 37365664 ~ 37365907 (+) True G2079465
XM_036964740.1 mRNA upstream 47233 37031161 ~ 37275082 (+) False LOC110536894
XM_036965234.1 mRNA upstream 458348 36707926 ~ 36863967 (+) False LOC110507948
trnat-agu-151 mRNA downstream 182546 37505561 ~ 37505634 (+) True trnat-agu-151
trnat-agu-152 mRNA downstream 182714 37505729 ~ 37505802 (+) True trnat-agu-152
XM_036965780.1 mRNA downstream 213514 37536529 ~ 37568873 (+) False LOC110508012
XM_036965781.1 mRNA downstream 229699 37552714 ~ 37568873 (+) True LOC110508012
XM_021588455.2 mRNA downstream 729618 38052633 ~ 38060113 (+) True LOC110508017
TU2377335 other upstream 41483 37279105 ~ 37280832 (+) True G2079197
TU2377138 other upstream 45458 37273486 ~ 37276857 (+) True LOC110536894
TU2376553 other upstream 882961 36438375 ~ 36439354 (+) True LOC110508005
TU2376426 other upstream 1020273 36300938 ~ 36302042 (+) False G2078493
TU2377712 other downstream 43724 37366739 ~ 37368136 (+) True G2079468
TU2377942 other downstream 492863 37815878 ~ 37819286 (+) False G2079657
TU2377944 other downstream 492863 37815878 ~ 37819286 (+) True G2079657
TU2378436 other downstream 621917 37944932 ~ 37945151 (+) True G2080014
TU2380510 other downstream 2504643 39827658 ~ 39837383 (+) True G2081884

Expression Profile