RNA id: TCONS_00000599



Basic Information


Item Value
RNA id TCONS_00000599
length 1251
RNA type mRNA
GC content 0.46
exon number 4
gene id XLOC_000351
representative True

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 29515160 ~ 29519002 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TGGACGCCAACACGAGTCTTGCGCTAAACACTGTTTTTGCGatgatttttttctgaaaagcCACGAAGAAAGAAAAAGCAAAGAAAGTGGGTAAAACAATGGATCGGCCAGCGTGGGCAGCAGGGACTCTCTGTGTTACAGAGAGAGTTGGAGTTAAATGATAGGACTGGTTTCAGAGAGCTACTGCGAATGACAGCAGAGGAGTTTGACTTATTGCTGGGGAAAGTTGAACACCTCATCACGAAGAAGGACACGAAGATGAGACTTGCAATACCACCAAGAGAGCGTCTGTCTTTGACACTGCGGTTCCTGGCAACAGgTGAAACCTTCAAGTCTCTCAGGTTCCAGTACAGGATTGGGACCAGCATCATCTCCCAAATAGTTGTGCAGACATGTGCTGCCCTGTACCAAGTTATGAAGACAGACTACCTCAAGACACCTTCAACGGAGGCAGAGTGGCAGTTAATAGCTCAGGACTTTGAAAGGAAATGGCAGTTTCCACATTGCCTTGGAGCACTTGATGGGAAACATATTCATATCCAGCCTCCCaaaaaaacaggaagtctttTCCACAATTACAAAGGCAGATTCTCGGTACTAATGATGGCTGCAGTTGATGCAAACTACAAGTTTGTCTATGCAAGCGTTGGTACCCAAGGTAGGGTGTCAGATGCTGGACTGTTTGCACACTCTGACCTGCGCAAAGCAATGGATCAGGGTCTACTACACTTTCCTCAACCTGAGCCTTTGCCAAATTCTAACATTGTGATGCCCTACATGTTTGTGGGTGATGATGCCTATCCACTAAGACCTGACCTAATAAAGCCATTCCCATTCAGGCATATGGACCATGGTCAAAGAATACTAAACTACCGTCTCTCAAGGGCAAGAAGAGTTGTGGAAAATGCATTTGGCATTCTTGCAAACAGGTTTAGAGTGTTCAGGTCGACCATAGGGTTAGAGCCTGAAAAGGTGATAAAAATTACAATGGCCTCCCTGTGCATCCACAACTTTCTGTGTGAGCGCAGGTCTGAGGCATATACACCTCCAGCCTTTACAGACTGGGAAAACTCTGAGCATGGCATGGTTGACGGACTGTGGAGAAGTCATGGGATGGGGAGTTTTCTGCCAGtggagcacactgtaaaaccaagGAATGCAACCGCAACTGCCAAAATGCAGCGGAACCATTTGCGGGACTATTTCGTCTCACCAGCTGGTAGCGTTCCTTGGCAGAACAAATATGTTTAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000152226

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00000598 lncRNA upstream 6687 29507647 ~ 29508473 (+) True XLOC_000350
TCONS_00002842 lncRNA upstream 14126 29500308 ~ 29501034 (+) True XLOC_000349
TCONS_00000597 lncRNA upstream 62427 29451465 ~ 29452733 (+) True XLOC_000348
TCONS_00000596 lncRNA upstream 69441 29444452 ~ 29445719 (+) True XLOC_000347
TCONS_00000595 lncRNA upstream 202601 29311527 ~ 29312559 (+) True XLOC_000346
TCONS_00000607 lncRNA downstream 287492 29806494 ~ 29809496 (+) True XLOC_000355
TCONS_00003081 lncRNA downstream 555633 30074635 ~ 30079529 (+) False XLOC_000358
TCONS_00002844 lncRNA downstream 555708 30074710 ~ 30079529 (+) False XLOC_000358
TCONS_00002843 lncRNA downstream 555732 30074734 ~ 30079529 (+) True XLOC_000358
TCONS_00000621 lncRNA downstream 1204378 30723380 ~ 30727619 (+) False XLOC_000364
TCONS_00000594 mRNA upstream 124126 29281764 ~ 29391034 (+) True XLOC_000345
TCONS_00000593 mRNA upstream 243687 29267841 ~ 29271473 (+) True XLOC_000344
TCONS_00000592 mRNA upstream 286767 29211540 ~ 29228393 (+) True XLOC_000343
TCONS_00000590 mRNA upstream 312471 29183962 ~ 29202689 (+) False XLOC_000342
TCONS_00000586 mRNA upstream 335230 29178117 ~ 29179930 (+) False XLOC_000341
TCONS_00000600 mRNA downstream 145334 29664336 ~ 29743640 (+) False XLOC_000352
TCONS_00000601 mRNA downstream 219420 29738422 ~ 29743635 (+) False XLOC_000352
TCONS_00000602 mRNA downstream 222841 29741843 ~ 29743469 (+) True XLOC_000352
TCONS_00000603 mRNA downstream 240676 29759678 ~ 29764056 (+) False XLOC_000353
TCONS_00000604 mRNA downstream 240676 29759678 ~ 29764060 (+) True XLOC_000353
TCONS_00000579 other upstream 434824 29068662 ~ 29080336 (+) False XLOC_000337
TCONS_00000565 other upstream 1513223 27977370 ~ 28001937 (+) False XLOC_000332
TCONS_00000567 other upstream 1519549 27984393 ~ 27995611 (+) True XLOC_000332
TCONS_00000557 other upstream 1784180 27713349 ~ 27730980 (+) False XLOC_000329
TCONS_00000518 other upstream 3395536 26111385 ~ 26119624 (+) True XLOC_000317
TCONS_00000608 other downstream 312757 29831759 ~ 29860373 (+) False XLOC_000356
TCONS_00000617 other downstream 646951 30165953 ~ 30166065 (+) True XLOC_000360
TCONS_00000618 other downstream 708389 30227391 ~ 30227505 (+) True XLOC_000361
TCONS_00000628 other downstream 1436923 30955925 ~ 30965004 (+) True XLOC_000366
TCONS_00000632 other downstream 1538238 31057240 ~ 31063850 (+) True XLOC_000367

Expression Profile


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