RNA id: TU91138


Basic Information

Item Value
RNA id TU91138
length 282
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G68231
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 40644849 ~ 40645154 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgtccgtgtgtctgtccctctgcctgtctgtgtgtgtgtctctgtccgtgtgtgtctctgtgtgtctgtctgcctgtctatgactgtctctgtgtgtctgtctgcctgtctatgactctccgtgtgtgtgtgtgtgtctctgcctgtccgtgtctctctgcctgtgtgtgtgtgtgtgtgtgtgtgtctctgtccgtgtgtgtctctgtgtctctgtccgtgtgtgtctctgtgtgtctgtctgcctgtctatgactgtccatgtgtgtgtgtgcgtct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91137 lncRNA upstream 31417 40607858 ~ 40613432 (+) True G68230
TU91135 lncRNA upstream 45813 40578944 ~ 40599036 (+) True G68228
TU91033 lncRNA upstream 85927 40557519 ~ 40558922 (+) True G68148
TU91034 lncRNA upstream 85927 40557519 ~ 40558922 (+) False G68148
TU91035 lncRNA upstream 85927 40557519 ~ 40558922 (+) False G68148
TU91142 lncRNA downstream 3951 40649105 ~ 40718646 (+) True G68233
TU91158 lncRNA downstream 61858 40707012 ~ 40707517 (+) True G68246
TU91164 lncRNA downstream 76605 40721759 ~ 40722296 (+) True G68249
TU91166 lncRNA downstream 80166 40725320 ~ 40725813 (+) True G68251
TU91168 lncRNA downstream 99170 40744324 ~ 40745021 (+) True G68252
XM_039804395.1 mRNA upstream 2680 40566070 ~ 40642169 (+) True snrnp200
XM_039804393.1 mRNA upstream 88783 40534048 ~ 40556066 (+) True zfand5a
XM_039804394.1 mRNA upstream 88783 40534048 ~ 40556066 (+) False zfand5a
XM_039804050.1 mRNA upstream 138363 40400615 ~ 40506486 (+) True igsf9b
XM_039802032.1 mRNA upstream 246726 40379395 ~ 40398123 (+) True tmem230b
XM_039803455.1 mRNA downstream 22171 40667325 ~ 40678275 (+) True tmem127
XM_039803456.1 mRNA downstream 39085 40684239 ~ 40693059 (+) True es1
XM_039804051.1 mRNA downstream 53762 40698916 ~ 40728821 (+) True tmc1
XM_039802124.1 mRNA downstream 92793 40737947 ~ 40778045 (+) True tmc2b
XM_039802125.1 mRNA downstream 92793 40737947 ~ 40778045 (+) False tmc2b
TU91093 other upstream 262399 40379417 ~ 40382450 (+) False tmem230b
TU91064 other upstream 410258 40233473 ~ 40234591 (+) True G68173
TU91053 other upstream 494172 40144759 ~ 40150677 (+) False vps33a
TU91051 other upstream 502367 40133792 ~ 40142482 (+) False vps33a
TU90883 other upstream 1230868 39410238 ~ 39413981 (+) False G68023
TU91208 other downstream 222093 40867247 ~ 40897108 (+) True G68285
TU91230 other downstream 299379 40944533 ~ 40949978 (+) False trpm6
TU91231 other downstream 304366 40949520 ~ 40949978 (+) False trpm6
TU91239 other downstream 379845 41024999 ~ 41038738 (+) True G68309
TU91293 other downstream 548104 41193258 ~ 41207379 (+) False anxa1a

Expression Profile