Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU459790 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.29 |
| exon number | 1 |
| gene id | G387911 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 16094948 ~ 16095158 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU459779 | lncRNA | downstream | 12185 | 16080215 ~ 16082763 (-) | True | G387900 |
| TU459776 | lncRNA | downstream | 16937 | 16077186 ~ 16078011 (-) | True | G387897 |
| XR_004577450.1 | lncRNA | downstream | 46777 | 16043897 ~ 16048171 (-) | False | LOC117596269 |
| XR_004577451.1 | lncRNA | downstream | 46777 | 16046300 ~ 16048171 (-) | True | LOC117596269 |
| TU459734 | lncRNA | downstream | 87878 | 16005463 ~ 16007070 (-) | True | G387861 |
| TU459804 | lncRNA | upstream | 21463 | 16116621 ~ 16118056 (-) | True | G387921 |
| TU459900 | lncRNA | upstream | 46768 | 16141926 ~ 16142320 (-) | True | G388004 |
| TU459934 | lncRNA | upstream | 121860 | 16217018 ~ 16217648 (-) | True | G388038 |
| TU459935 | lncRNA | upstream | 122565 | 16217723 ~ 16218160 (-) | True | G388039 |
| TU459986 | lncRNA | upstream | 211351 | 16306509 ~ 16307126 (-) | True | G388082 |
| XM_026921755.2 | mRNA | downstream | 19656 | 16069205 ~ 16075292 (-) | True | si:ch211-284e13.5 |
| XM_026921756.2 | mRNA | downstream | 19657 | 16069205 ~ 16075291 (-) | False | si:ch211-284e13.5 |
| XM_026921778.2 | mRNA | downstream | 62433 | 16021513 ~ 16032515 (-) | True | hsd20b2 |
| XM_026921773.2 | mRNA | downstream | 95313 | 15987177 ~ 15999635 (-) | False | gnb2 |
| XM_026921779.2 | mRNA | upstream | 37945 | 16133103 ~ 16140365 (-) | True | si:dkey-17o15.2 |
| XM_034300834.1 | mRNA | upstream | 119030 | 16214188 ~ 16215318 (-) | True | LOC113531237 |
| XM_034300433.1 | mRNA | upstream | 123603 | 16218761 ~ 16220851 (-) | True | armh3 |
| XM_026921722.2 | mRNA | upstream | 145005 | 16240163 ~ 16255105 (-) | True | wdr44 |
| XM_026921813.2 | mRNA | upstream | 268336 | 16363494 ~ 16380753 (-) | True | LOC113531235 |
| TU459046 | other | downstream | 1171564 | 14916662 ~ 14923384 (-) | True | ccdc84 |
| XR_003403286.1 | other | downstream | 2179451 | 13915364 ~ 13915497 (-) | True | LOC113531684 |
| XR_003403280.1 | other | downstream | 2281619 | 13813233 ~ 13813329 (-) | True | LOC113531678 |
| XR_003403212.2 | other | downstream | 4396404 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
| XR_004577404.1 | other | downstream | 4467426 | 11621662 ~ 11627522 (-) | False | map1b |
| XR_003403223.2 | other | upstream | 282427 | 16377585 ~ 16380787 (-) | False | LOC113531235 |
| trnam-cau_50 | other | upstream | 336234 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
| trnam-cau_51 | other | upstream | 340040 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| TU460427 | other | upstream | 871130 | 16966288 ~ 16970026 (-) | False | crx |
| LOC117596251 | other | upstream | 960425 | 17055583 ~ 17057882 (-) | True | LOC117596251 |
