Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026921813.2 |
| length | 1188 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 2 |
| gene id | LOC113531235 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 16363494 ~ 16380787 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0090305 | nucleic acid phosphodiester bond hydrolysis | biological_process |
| GO:0001525 | angiogenesis | biological_process |
| GO:0050829 | defense response to Gram-negative bacterium | biological_process |
| GO:0050830 | defense response to Gram-positive bacterium | biological_process |
| GO:0004540 | ribonuclease activity | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| id | description |
|---|---|
| K16631 | ANG, RNASE5; angiogenin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU459998 | lncRNA | downstream | 26370 | 16334604 ~ 16337124 (-) | True | G388091 |
| TU459986 | lncRNA | downstream | 56368 | 16306509 ~ 16307126 (-) | True | G388082 |
| TU459935 | lncRNA | downstream | 145334 | 16217723 ~ 16218160 (-) | True | G388039 |
| TU459934 | lncRNA | downstream | 145846 | 16217018 ~ 16217648 (-) | True | G388038 |
| TU459900 | lncRNA | downstream | 221174 | 16141926 ~ 16142320 (-) | True | G388004 |
| TU460049 | lncRNA | upstream | 48474 | 16429227 ~ 16435379 (-) | True | G388134 |
| TU460340 | lncRNA | upstream | 266222 | 16646975 ~ 16698779 (-) | True | G388359 |
| XR_004577437.1 | lncRNA | upstream | 306282 | 16687035 ~ 16689045 (-) | True | LOC117596255 |
| TU460375 | lncRNA | upstream | 377487 | 16758240 ~ 16763476 (-) | True | fxyd2 |
| TU460398 | lncRNA | upstream | 448995 | 16829748 ~ 16838048 (-) | True | G388408 |
| XM_026921722.2 | mRNA | downstream | 108389 | 16240163 ~ 16255105 (-) | True | wdr44 |
| XM_034300433.1 | mRNA | downstream | 142643 | 16218761 ~ 16220851 (-) | True | armh3 |
| XM_034300834.1 | mRNA | downstream | 148176 | 16214188 ~ 16215318 (-) | True | LOC113531237 |
| XM_026921779.2 | mRNA | downstream | 223129 | 16133103 ~ 16140365 (-) | True | si:dkey-17o15.2 |
| XM_026921755.2 | mRNA | downstream | 288202 | 16069205 ~ 16075292 (-) | True | si:ch211-284e13.5 |
| XM_026921751.2 | mRNA | upstream | 195025 | 16575778 ~ 16580533 (-) | True | chrm1b |
| XM_026922247.2 | mRNA | upstream | 245200 | 16625953 ~ 16631364 (-) | True | LOC113531477 |
| XM_026921725.2 | mRNA | upstream | 277898 | 16658651 ~ 16668248 (-) | True | LOC113531175 |
| XM_026921724.2 | mRNA | upstream | 277898 | 16658651 ~ 16668212 (-) | False | LOC113531175 |
| XM_034300825.1 | mRNA | upstream | 313555 | 16694308 ~ 16703268 (-) | True | LOC113531479 |
| TU459046 | other | downstream | 1440110 | 14916662 ~ 14923384 (-) | True | ccdc84 |
| XR_003403286.1 | other | downstream | 2447997 | 13915364 ~ 13915497 (-) | True | LOC113531684 |
| XR_003403280.1 | other | downstream | 2550165 | 13813233 ~ 13813329 (-) | True | LOC113531678 |
| XR_003403212.2 | other | downstream | 4664950 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
| XR_004577404.1 | other | downstream | 4735972 | 11621662 ~ 11627522 (-) | False | map1b |
| trnam-cau_50 | other | upstream | 50639 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
| trnam-cau_51 | other | upstream | 54445 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| TU460427 | other | upstream | 585535 | 16966288 ~ 16970026 (-) | False | crx |
| LOC117596251 | other | upstream | 674830 | 17055583 ~ 17057882 (-) | True | LOC117596251 |
| TU460777 | other | upstream | 909591 | 17290344 ~ 17328020 (-) | True | G388705 |
