RNA id: AMCG00010248


Basic Information

Item Value
RNA id AMCG00010248
length 462
RNA type mRNA
GC content 0.46
exon number 3
gene id AMCG00010248
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 20967672 ~ 20972426 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGCGCAGAGTTTCTCATTTGGAAATACAGAgcaatgttttctttgcttgttttaattgcagtcaTCTGCAGAGTCCACTACGCTACAGCCGTGCCAGTGGAGAACGGAGCACCTCTGGCCAAAATATACCCCAGAGGCAACCACTGGGCTGTAGGACATTTGATGGGAAAGAAGAGTAttgatttcccttttcaaaCTGAAGAAGGTGACAGGACCCAATATTTATCTGCACCAGAAGAAGCCAAGCAGGTGGATGGATATTTGAAGTGGTCTGAAGACATCAAAAACCTCATAAGAGCCTTAGATGTGAGTGGCAGCCAGACTGGTCAGTTTTTAAAAGAAGGGTTGCCTCTTAGTAGAAAGACTCCATTGGAGGTGAGGGAAAGGAGCATGGACTTGAAAGAGgtcACAGACTACCTGCTGCAGGCTCTCAATATGAAGGAGAACAGGCCCAgctga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU98700 lncRNA downstream 55489 20911411 ~ 20912183 (-) True G79143
TU98642 lncRNA downstream 499976 20467305 ~ 20467696 (-) True G79092
TU98638 lncRNA downstream 550670 20416790 ~ 20417002 (-) True G79088
TU98632 lncRNA downstream 675255 20292143 ~ 20292417 (-) True G79082
TU98626 lncRNA downstream 764671 20199049 ~ 20203001 (-) True G79077
TU98739 lncRNA upstream 78385 21050811 ~ 21052563 (-) True G79179
TU98807 lncRNA upstream 137161 21109587 ~ 21112212 (-) True G79234
TU98847 lncRNA upstream 514281 21486707 ~ 21487020 (-) True G79257
TU98856 lncRNA upstream 568593 21541019 ~ 21546314 (-) False AMCG00010262
TU98890 lncRNA upstream 664018 21636444 ~ 21637006 (-) True G79297
AMCG00010242 mRNA downstream 186703 20770284 ~ 20780969 (-) True AMCG00010242
AMCG00010240 mRNA downstream 365299 20591736 ~ 20602373 (-) True AMCG00010240
AMCG00010239 mRNA downstream 440753 20505376 ~ 20526919 (-) True AMCG00010239
AMCG00010241 mRNA downstream 480532 20486176 ~ 20487140 (-) True AMCG00010241
AMCG00010234 mRNA downstream 774743 20188658 ~ 20192929 (-) False AMCG00010234
AMCG00010247 mRNA upstream 81198 21053624 ~ 21078391 (-) True AMCG00010247
AMCG00010246 mRNA upstream 151576 21124002 ~ 21173380 (-) True AMCG00010246
AMCG00010262 mRNA upstream 569049 21541475 ~ 21572512 (-) True AMCG00010262
AMCG00010265 mRNA upstream 618542 21590968 ~ 21591558 (-) True AMCG00010265
AMCG00010264 mRNA upstream 689164 21661590 ~ 21681366 (-) True AMCG00010264
TU98705 other downstream 26279 20931171 ~ 20941393 (-) True G79147
TU98072 other downstream 3021911 17945235 ~ 17945761 (-) True G78610
TU98067 other downstream 3111942 17852867 ~ 17855730 (-) False AMCG00010190
TU98065 other downstream 3123283 17840992 ~ 17844389 (-) False AMCG00010188
TU96773 other downstream 9238507 11728503 ~ 11729165 (-) True G77544
TU98765 other upstream 103515 21075941 ~ 21081825 (-) False AMCG00010247
TU98958 other upstream 992103 21964529 ~ 21981974 (-) True AMCG00010271
TU99198 other upstream 2110420 23082846 ~ 23085985 (-) False AMCG00010288
TU99273 other upstream 2387217 23359643 ~ 23364947 (-) True G79601
TU99963 other upstream 5400316 26372742 ~ 26379747 (-) True AMCG00010364

Expression Profile