RNA id: AMCG00010262


Basic Information

Item Value
RNA id AMCG00010262
length 1131
RNA type mRNA
GC content 0.48
exon number 10
gene id AMCG00010262
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 21541019 ~ 21572512 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TATTTGGGATGTATTGAAGTGTTACGGTCAATGAGATCACTAGACTTCAACACAAGATCACAAATTACAAGGGAAGCTATCAGTCGAGTGTGTGAAGCTGTCCCAGGTGCCAAAGGAGCATTTCGCAAAAGAAAGCCCCCAAGTAAAGCACTCTCCAGCATTCTAGGAAAGAGTAACCTTCAGTTTGCAGGAATGAGCATCACTCTGAACATTTCAACCAGCAGCTTGAACTTGATGACTCCAGATTCTAAACAGataATCGCAAATCATCACATGCAATCCATTTCCTTTGCATCTGGTGGAGATCCGGACACTACCGATTATGTTGCATATGTTGCAAAAGATCCTGTAAATCGCAGAgCTTGTCATATTCTCGAGTGCTGTGATGGCTTGGCCCAGGACGTCATTAGTACCATTGGGCAAGCGTTTGAACTGAGATTTCGGCAATACCTGCAGTGTCCTTCCAAACTCCCCATGCTTCATGACAGGATGTTGAATGTAGATGAGTCCCCGTggacagaagaagaagaggaaacgGCCGAGCATCCATATTACAACAACATCCCAGGGAAGATGCCCCCTCCGGGAGGATTCATCGATGCTAGACTGAAGAACCAACCATCTGCCCAGTCAGAGGGCCCTCAGGCTAGCACAGTGACTGGAATAGACCAAACCTACTACCAAGGGCGCCACTTTGGGGAGAGCCGGAGTGAGGACCGGAAGCCTGCGCCAGTCAGGCAAGGCCCTGTATTGAGTAAGACTGCCTCTGTGGACAACTCCAGCCCTCTCCTGGTTAGAGCGTCAGCCTTCAATGTGAGTGAAGAACTGAATTCACAATTGTGGTACCACAGAGAAATGAGCAGAAAAGAGGCAGAGCAGGTGCTGAAGGAGGATGGAGACTTTCTGGTCAGAAAAAGCACCACAAATCCTGGCTCCTATGTACTGACGGGCATGCACAATGGGCAGGCCAAACATCTTCTTTTGGTAGATCCTGAAGGAACAGTACGGACGAAAGATCATGTATTTGACAGCATAAGCCACCTAATTAGCCATCACCGTGACAACAGTTTGCCAATAGTGTCTGCAGGAAGTGAACTTTGTCTTAAACAGCCAGTAGCAAGAAAACAGTGA

Function

GO:

id name namespace
GO:0001525 angiogenesis biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU98847 lncRNA downstream 54455 21486707 ~ 21487020 (-) True G79257
TU98807 lncRNA downstream 429263 21109587 ~ 21112212 (-) True G79234
TU98739 lncRNA downstream 488912 21050811 ~ 21052563 (-) True G79179
TU98700 lncRNA downstream 629292 20911411 ~ 20912183 (-) True G79143
TU98642 lncRNA downstream 1073779 20467305 ~ 20467696 (-) True G79092
TU98890 lncRNA upstream 63932 21636444 ~ 21637006 (-) True G79297
TU98891 lncRNA upstream 65167 21637679 ~ 21637897 (-) True G79298
TU98892 lncRNA upstream 66484 21638996 ~ 21640109 (-) True G79299
TU98894 lncRNA upstream 70818 21643330 ~ 21643533 (-) True G79301
TU98895 lncRNA upstream 72633 21645145 ~ 21645584 (-) True G79302
AMCG00010246 mRNA downstream 368095 21124002 ~ 21173380 (-) True AMCG00010246
AMCG00010247 mRNA downstream 463084 21053624 ~ 21078391 (-) True AMCG00010247
AMCG00010248 mRNA downstream 569049 20967672 ~ 20972426 (-) True AMCG00010248
AMCG00010242 mRNA downstream 760506 20770284 ~ 20780969 (-) True AMCG00010242
AMCG00010240 mRNA downstream 939102 20591736 ~ 20602373 (-) True AMCG00010240
AMCG00010265 mRNA upstream 18456 21590968 ~ 21591558 (-) True AMCG00010265
AMCG00010264 mRNA upstream 89078 21661590 ~ 21681366 (-) True AMCG00010264
AMCG00010263 mRNA upstream 184668 21757180 ~ 21772537 (-) True AMCG00010263
AMCG00010271 mRNA upstream 393814 21966326 ~ 21982050 (-) False AMCG00010271
AMCG00010267 mRNA upstream 434902 22007414 ~ 22011792 (-) True AMCG00010267
TU98765 other downstream 459650 21075941 ~ 21081825 (-) False AMCG00010247
TU98705 other downstream 600082 20931171 ~ 20941393 (-) True G79147
TU98072 other downstream 3595714 17945235 ~ 17945761 (-) True G78610
TU98067 other downstream 3685745 17852867 ~ 17855730 (-) False AMCG00010190
TU98065 other downstream 3697086 17840992 ~ 17844389 (-) False AMCG00010188
TU98958 other upstream 392017 21964529 ~ 21981974 (-) True AMCG00010271
TU99198 other upstream 1510334 23082846 ~ 23085985 (-) False AMCG00010288
TU99273 other upstream 1787131 23359643 ~ 23364947 (-) True G79601
TU99963 other upstream 4800230 26372742 ~ 26379747 (-) True AMCG00010364
TU101107 other upstream 10381872 31954384 ~ 31971755 (-) True AMCG00010487

Expression Profile