LOC110536894


Basic Information

Item Value
gene id LOC110536894
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37031161 ~ 37276857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964740.1
GAAGAGAGCGCAGGAGAGCGGGAGAGGAGAGTGCGTGTTCTGTCTTATGCGCACTTCTGACTGCTCTGGTTTgcttgacagtgtgtgtgtgtgtgtgtgtgtgtttttgagtcCTGCGCTCAGCATACGGCAGGTGGAGATGACATGACTGCGcttgagaggaagagagggagggacctACGCGGTCAACAAGTATTCCTGAGGCCAGACGAGACCGCAGCTCTAACCCTGACTGACCGACTACAGTGATGATGCGTGCGGTTTGCCGGGCGGAGGGCAGCGCTAGGCAGCGGCTGAGGGAGGAGGATGCTTTACTGCGGCTGGCAGGAGTTGTTGACGTGCGCTCACTCCGAGATGCTCTCAGAGAGACCGCACAGGGGCTACTGCCCAGCGTGgagtgtgtttgtgtgtacgtgcTGGAGAGAGACTCGAGGCTACAGTGTGACGACCCAAGCCATGAGCTGCCAAAGGAGGGGAAGATCAGGGATATGGTGGGTCAgttgaagaggtgtgtgtgtgccggtCTACCTCCCTCAGAGATGCACGAGAAACACAGGAGCAGCCTTGCAGCACCCCTCCCACCCCACAGACgagctgtggTAATTCCTCTCGTGGACCAGGAACAAGGAGTTGTCATCTCAGTCTTACTGGTGGGCTGTAAACCGCTGAGTGATCAAGACGAACAACACCTCAACACTCTGGAGAAACATgcagctGTAGCGTGTAGGAGGGTACGAACCCTGCAGTCGGCCAATCAGAAGTCTCTCGTCAGCCTGTCACCGATCCAGCCCCACAATGCACTGCTCCGGCCCGACCCCACAGACTACTGTGACCTGGACCGCAAGATTCTACAGCTgtgtggtgagctGTATGACCTTGATGCAACTACTCTTCAGCTCAAAGTAATCAATTATTTGCAGCAGCAGACCCAGTCTCAGTGCTGCTGTCTGCTTCTGGTTTCTGAGGACAACCACCAGCTCTTCTGTCAGgtGGTTGGAGACAAAGTTCTGGAGGAGGAGATCAGCTTCCCTCTGATGTTTGGGCGCTTTGGGCAGGTAGTGGAGAAGAAGAGATCCATCACTCTTCAGGACGTCACTGCGgaGGAGCGTAGACAGCTATCCAGTATGCTGGGCAGTGAGGTGTCCTCTCTGCTATGTGTCCCTGTGGTCAGCAGAGCCACTGGCCAGGTGGTGGCACTAGCCTGCGCCTTCAACAAACAGGGAGGACAgagACACACGGATGTGGATGAACATACGATCCAGCACTGCTTCTGTTACACCTCCACTGTCCTCACCTCCACACTGGCCTTCCAGAAAGAACAGAAACTCAAAGTGGAGTGTCAGGCACTGTTACAGGTGGCCAAGAATCTCTTCACACATCTGGatgaTGTCTCCGTGTTGTTGCAAGAGATTATAGTGGAGGCCAGGAACCTCAGTGATGCAGAGATTTGCTCTGTGTTCCTACTGGATCAAGTCAGCCATGAGCTGGTTGCCAAGGTTTTTGATGGGGGCGTGGTCAGTGATGATGAGaAGGAGTTCCGTATCCCTGCAGACCAGGGCATAGCGGGTCATGTAGCTATGACTGGGCAGATCCTGAACATTAAGGATGCGTACTCCCACCCTCTGTTCTACCGAGGAGTGGACGACAGCACCGGGTTTAGAACACGGAACATCCTCTGCTTCCCCATCAAGGACGAGAACAACGaggttaTTGGGGTGGCTGAGTTGGTCAATAAGACTAATGGACCATGGTTTAACCGCTTCGATGAGGACCTGGCCACTGCTTTCTCCATCTACTGTGGAATCAGCATCGCACACTCTCTTCTGTATAAGAAGGTCCATGAGGCTCAGTTCAGATCCCACCTGGCCAACGAGATGATGATGTACCACATGAAGgtGTCAGCAGAGGAGGTGACCCAGCTGTTGGTAACTGGGCTGGAGCCAGTGGAAGAGATTCATCCCTTATTCGCTGAGTTCACCTACACACCCCGTTCACTACCTGACGACAACACACCCATGGGCATCCTGAGTATGTTTGAGGACATGGGCTTCATCAACGCCTATAAGATTGACCTGCACACTCTGGCCAGGTTCTGTCTGATGGTAAAGAAGGGTTACAGAGATCCTCCCTATCACAACTGGACACACGCGTTCTCGGTCTCTCACTTCTGTTATCTCCTCTACAAGAACCTGGGCCTGGCCAACTACCTGGAgaATATAGAGATCTTTGCTCTCTTTGTCTCCTGTATGTGTCATGACCTGGACCACCGTGGGACTAACAACTCCTTTCAAGTGGCCTCACAATCTGTCCTGGCTGCCCTCTACAGCTCAGAGGGCTCTGTGATGGagCGACACCACTTTGCCCAAGCCATAGCCATTCTGAACACCCACGGCTGCAACATCTTCGACAAGTTCTCCAGAAAGGACTACCAGAGGATGTTGGACTTGATGAGGGATATTATCCTGGCCACTGACCTGGCTCACCACCTCCGCATCTTCCCCGACCTGCAAAGGATGGCTGACGctgGCTACAATCCCAGGAATCAGACCCACCGTTCTCTGCTGCTGTGCCTGCTGATGACCTCATGCGACCTGTCGGACCAGACCAAGGGCTGGAAGACCACCCGCAAGATTGCTGAGCTGATCTATAAAGAGTTCTTCTCCCAGGGGGATCTGGAGAAGGCGATGGGGAATCGTCCCAGTGAGATGATGGACAGAGAGAAGGCCTACATCCCAGAGCTACAGATCAGCTTCATGGAACACATCGCCATGCCCATCTACAAGCTGCTGTCAGAGCTGTTACCAGGGGCAACCGAGCTGTATGAGCGTGTAGCGACCAATCGAGTACAGTGGACCAAAGTCTCCCACAAGTTCAGCGTCCGTGGGTTGCCTAGCAACAATAGCCTCGACTTCCTGGATGAAGAATATGAATTGCTGCAATCCCAGGGTGCACTTGGGGATGACAGCCACTGCGATGACACCCATTGCCTCAACGGTTGCCTGGATGAGGGGGACGGGGGGAGGGGCCTGTAACCATACTGACCAATGGGAGTGGAGAAAGCAGTATCTCTAGGCTAATAGAAACCTAAGGAAACTATTCCCTTTTTACGTCCTCATGCGGAGAAGGCGGGACTCTGAGACAGTTTGACATTTGACTGACAGCTGTCAATCTCTAAGGCTGAGCAAAACAGATGGAGTGAACCGCAGGAGTGACGATTCAGATGAGTCATTTCAAAGGAGTCGATTCAGACTAGTCGATTCAGACGATTCCTGTAGATGCTAAATGTGACTGAACTCctgtgaggaaaggagagagtcGTGTTGACTCTGGAAATGATCATTTTCATAACGAGGTCTCCGTTCATATTCTTCTGAGTTTCTGtttcacacacagactcacagacaccTAATAGGTCAATACCCGTGTAATAACACATAGGTAAAGAGCTCCTTTCCTAGTTAACAGAAAGCTGTGTAGTACGAAGGACAGTTCTGGAATCTGTTGGTTTATGTTGTTTTAAGATCATCAGAATCCCTCCCATCAGCCCACACACACCCTGATGAGCTGCTATGTCACTCATATGACTGCTTATGTATACTGTATGCAGCCTACACCTTGTGTGTTACACCCTTTATCTCAGCCAGTATTGGATGTATTTTTCATGTCTTAGGCATCATGTAAGTCTCTAGTTTGCCAGATGTTATATTTGTTATTATATATGGAGCCCATTGGTGGCCCTGCGATGCCCAGTGGTCATTGAGGGAAACTGAATCTGCCTTGTGTCAGGTAATGTGAGTGGAACTTCCCTCTTTTGGAAATGGGGACAGTTTGACAGTCAATGATCACTGGTCAGTGCCATCCTCATTAGCTAAAATCTTCTATCCCTggagtgcgcacacacacacacagacacacacacacacagacatacacacagacaccacaaccACCATTACAACCTTCACAACAAGAGCCACTAAGAGCCATTCCTCCTTTCTTCTTAgtgttcctctctgtgtctctatataaCCCCTACAACCCGCTATATAAGTGAAGCCCTTGAAATGATCCAGTGTCatcatacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgccttaTCGTGCTATGCTGCCTTTCTCAGAGCTTGCCATGTTGGACCATAGATACAAACAGACACAGAGGCCAAACAGTATCTCCAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTGTAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTGTAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGATAGTGTGTCGGTTAACAGTGTGTTGGTTATCAGTGTGTTGGTTATCATTGTGTTGGTTAACAGTGTGTTGGTTATCATTGTGTTGGTTAACAGTGAGTTCACTGTCTCAGGAGTTTAAAACACACTACCACTCAACTCCAATCAATCAGTCACCTAAATGTTAAACTAATGTGTGAAACTGCTGCTCGGTGAAGCCAGAGCAACAGCTTAGCCTCACCACATGTCAGGgcttacatactgtatatgtggAAGAATTAAGGCCATACAGGTCAATATATTTGTTAAAAGGGCGTACAGGTCAATATATTTGTTAGGTAAATGAACTGGGGATATTGGTTAGGTGACAGGGGCGTACAGGTCAATATATTTGTTAGGTGAATGAACTGGGGATCTTGGTTAGGTGACAGGGGCGTACAGGTCAATATATTTGTTAGGTGAGTGGGCTATAGGTGAATATATGGATGGACTGCATATAGCTTCATATATTTTGTAGATGATTCTCCCTcaggatgtctgtgtgtgtgacttcaCTGACTTTGACTTCATGTTATTGTACAGATTGTAACTGTTCTATTGGCATTCAGGTAGGCTAGCGATCTGAAGCCTCGCTCTAGTGCTGTATACCTGTGAACTCTGACCCCTGATGAACACAGATTAACTTCCTCTTTtcccctgttgttgttgttgttgttgttttccgcCCATCCATTCCAGATCTGCCTTCTTCATATGtattttgatgatgatgatgcagaAACTCTGATGTAAATACAGTCTGCTCTTAAATTATTACTTTAGACAGTTGTCTCTCTTAACTTTGTTTTACGTTAGTGTGTTTGTGTCAACGAGTCAGGGCTCCGTCATGTGCCAATCTCCATCTCCACGGAAACGCAGGATTCTTACCTGTGATGTAATCTCATAGGCTATATATAAATGCTGTAAATAACAGTTTATGAAGTGTTACTTGATTCTATGTAATTATTACAATGAGGACTATTTTAATTATTTCatgttatacagttgaagtcggaagtttgcagacacttaggttggagtcattaaaactcgtttttcaaccactccacaaatttcttgttaacaaactatatagttttggcaagtcgg
>TU2377138
cttaTCGTGCTATGCTGCCTTTCTCAGAGCTTGCCATGTTGGACCATAGATACAAACAGACACAGAGGCCAAACAGTATCTCCAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGACAGTGTGTTGATGAACAGACCTATAGATGATAGTGTGTCGGTTAACAGTGTGTTGGTTATCAGTGTGTTGGTTATCATTGTGTTGGTTAACAGTGTGTTGGTTATCATTGTGTTGGTTAACAGTGAGTTCACTGTCTCAGGAGTTTAAAACACACTACCACTCAACTCCAATCAATCAGTCACCTAAATGTTAAACTAATGTGTGAAACTGCTGCTCGGTGAAGCCAGAGCAACAGCTTAGCCTCACCACATGTCAGGgcttacatactgtatatgtggAAGAATTAAGGCCATACAGGTCAATATATTTGTTAAAAGGGCGTACAGGTCAATATATTTGTTAGGTGAATGAACTGGGGATCTTGGTTAGGTGACAGGGGCGTACAGGTCAATATATTTGTTAGGTGAGTGGGCTATAGGTGAATATATGGATGGACTGCATATAGCTTCATATATTTTGTAGATGATTACAGATTAACTTCCTCTTTtcccctgttgttgttgttgttgttgttttccgcCCATCCATTCCAGATCTGCCTTCTTCATATGtattttgatgatgatgatgcagaAACTCTGATGTAAATACAGTCTGCTCTTAAATTATTACTTTAGACAGTTGTCTCTCTTAACTTTGTTTTACGTTAGTGTGTTTGTGTCAACGAGTCAGGGCTCCGTCATGTGCCAATCTCCATCTCCACGGAAACGCAGGATTCTTACCTGTGATGTAATCTCATAGGCTATATATAAATGCTGTAAATAACAGTTTATGAAGTGTTACTTGATTCTATGTAATTATTACAATGAGGACTATTTTAATTATTTCatgttatacagttgaagtcggaagtttgcagacacttaggttggagtcattaaaactcgtttttcaaccactccacaaatttcttgttaacaaactatatagttttggcaagtcggttaggacatctactttgtgaatgacacaagtcatttttccaacaattgtttacagacagattatttcacttataattcactgtatcacaattccagtgggtcagaagtttacatacactaaattgactgtgcctttaaacagcttggaaaaatccagaaaatgatgtaatggcttcctgataggctaattgacatcatttgagtcaattggaggtgtacctgtggatgtatttcaaggtctaccttcaaactcagtgcctctttgcttgacatcatgaaaaaaatcaaaataaatccaaataaaaaataaatcagccaagacctcagaaaaaaaattgtagacttccacaagtctggttcatccttgggagcaatttccaaacacctgaaggtaccacgttcatttgtacaaacaatattacgcaagtataaacaccatgggaccacgcagccgtcataccgctcaggaaggagacgcgttctgtctcctagggatgaacgtacttcggtgtgaaatgtgcaaatcaatcccagaacaacagcaaaggaccttgtgaagatgctggaggaaacaggtacaaaagtatctatatccacagtaaaacgagtcctatatcgacataacctgaaaggccactcagaaaggaagaagccactgctccaaaaccgccataaaaaagtcagactacggtttgcaaatgcacatggggacaaagatcgtactttttggagaaatgtcctctggtctgatggaacaaaaatagaactgtttggccataatgaccatcgttatgtttggaggaaaaagggggaggcttgcaagccgaaaaacaccatcccaaccatgaagcacgggggtggcagcatcatgaggcagggaaaatgatgtggatacattgaagcaacatctcaagacatcagtcgggaagttaaagcttggtcgcaaatgtgtcttccaaatggacaataaccccaagcacatttccagttgtggcaaaatggcttaaggacaacaaactcaaggtattggagtggccatcacaaagccctgacctcatatagaacatttgtgggcagaactgaaaaagcgtgtgagagcaaggaggtacaaacctgactcagttacaccagctctgtcaggagaaatgggccaacattcacccaacttattgtgggaagcttgtggatggctgcccgaaacgtttgaccaatgttaaacaatttaaaggcagtgctaccaaatactaattgagtgtatacaaacttctgaccccctgggaatgtgatgaaagaaataaaagctgaaataaatccttctctctactattattctgacagttcacattcttaaaataaactggtgatcctaactgacctaaaacagggaatttttacttggattaaatgtcaggaattgtaaaaaattgagtttatatgtatttagctaaggtgtatgtaaacttccaacttcaactggggcggcagggtagcctagtggttagagtgttggactagtaactgaaaggttgcaagttcaaatccccgagttgacaaggtacaaatctgtcgttttgcccctgaacaggcagttaacccactgttcctaggcggtcattgaaaataagaatttgttcttaactgacttgcctagttaaataaaggtaaaataaaatcaaCTGTATACTGTGGTTGTAGTTGAATCATCTTTTTCTCTCATTTTCATTGTGTTATTGAAGGGCCCAAAACATGCAGACCTACGGCTCAGACAGAGGAGG

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007165 signal transduction biological_process
GO:0046872 metal ion binding molecular_function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964740.1 False 5799 mRNA 0.48 31 37031161 37275082
TU2377138 True 2922 TUCP 0.40 5 37273486 37276857

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 167194 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 327638 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 412435 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 484664 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 590452 36438225 ~ 36440709 (+)
mre11a mre11a coding downstream 43634 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 230479 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 230647 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 261447 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 777551 38052633 ~ 38060113 (+)
G2079091 NA non-coding upstream 691 37014509 ~ 37030470 (+)
G2079078 NA non-coding upstream 48198 36982763 ~ 36982963 (+)
G2079076 NA non-coding upstream 50419 36980523 ~ 36980742 (+)
G2079071 NA non-coding upstream 59166 36971747 ~ 36971995 (+)
G2079069 NA non-coding upstream 60640 36970322 ~ 36970521 (+)
G2079194 NA non-coding downstream 2627 37277709 ~ 37278966 (+)
G2079207 NA non-coding downstream 32213 37307295 ~ 37307932 (+)
G2079213 NA non-coding downstream 46487 37321569 ~ 37323327 (+)
G2079457 NA non-coding downstream 85472 37360554 ~ 37360820 (+)
G2079458 NA non-coding downstream 85857 37360939 ~ 37361300 (+)
G2078493 NA other upstream 729119 36263506 ~ 36302664 (+)
G2078425 NA other upstream 927060 36102874 ~ 36104101 (+)
G2078382 NA other upstream 997162 36033285 ~ 36033999 (+)
G2078296 NA other upstream 1098652 35932115 ~ 35932509 (+)
G2079197 NA other downstream 4023 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 91657 37366739 ~ 37368136 (+)
G2079657 NA other downstream 540796 37815848 ~ 37819286 (+)
G2080014 NA other downstream 669850 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2552576 39827658 ~ 39837383 (+)
G2079188 NA non-coding upstream 14362 37257044 ~ 37259124 (+)
G2079170 NA non-coding upstream 17173 37252761 ~ 37256313 (+)
G2079164 NA non-coding upstream 77515 37195748 ~ 37195971 (+)
G2079162 NA non-coding upstream 78839 37194388 ~ 37194647 (+)
G2079161 NA non-coding upstream 79366 37193831 ~ 37194120 (+)

Expression


Co-expression Network