G297465


Basic Information

Item Value
gene id G297465
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 17656225 ~ 17656811 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU352232
TGATTAGATACATGGCGATTACATACGTGATTAGATACATGATGATTAGATACATGTTTAGATACATGATTAGATACATGGCGATTACATACGTGATTAGATACATGATGATTAGATACATGTTTAGATACGTGATTAGATACATGGCGATTACATACGTGATTAGATACATGATTATTAGATACATGTTTAGATACGTGATTAGATACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU352232 True 212 lncRNA 0.31 2 17656225 17656811

Neighbor

gene id symbol gene type direction distance location
akap12b akap12 coding downstream 55465 17538910 ~ 17600760 (-)
armt1 armt1 coding downstream 135514 17512447 ~ 17520711 (-)
myct1a myct1 coding downstream 396359 17256381 ~ 17259866 (-)
serac1 serac1,LOC107555766 coding downstream 407304 17237824 ~ 17248921 (-)
si:dkey-12h9.6 LOC108258171,LOC103045157,LOC108424494,LOC105908978 coding downstream 424127 17216213 ~ 17232098 (-)
gpr176 gpr176,LOC102785786 coding upstream 27186 17683997 ~ 17699560 (-)
LOC113532304 LOC108257600 coding upstream 103808 17760619 ~ 17767511 (-)
LOC113531908 NA coding upstream 111733 17768544 ~ 17775954 (-)
fntb fntb,LOC108257588,LOC108424508,LOC107756604,LOC107668263,LOC107721314,LOC107671778,LOC106571088,LOC105024336 coding upstream 151487 17808298 ~ 17825400 (-)
zfyve1 zfyve1,LOC107721321 coding upstream 459739 18116550 ~ 18130493 (-)
G297442 NA non-coding downstream 173338 17482324 ~ 17482887 (-)
LOC113531886 NA non-coding downstream 234773 17415966 ~ 17421452 (-)
G297053 NA non-coding downstream 574111 17081872 ~ 17082114 (-)
G297052 NA non-coding downstream 589797 17065682 ~ 17066428 (-)
G297050 NA non-coding downstream 591840 17064166 ~ 17064385 (-)
G297670 NA non-coding upstream 48789 17705600 ~ 17760410 (-)
G297712 NA non-coding upstream 184750 17841561 ~ 17842853 (-)
G297718 NA non-coding upstream 198074 17854885 ~ 17953471 (-)
G297720 NA non-coding upstream 208477 17865288 ~ 17865651 (-)
G297724 NA non-coding upstream 217641 17874452 ~ 17874744 (-)
esr1 esr1 other downstream 149567 17485584 ~ 17506658 (-)
gtf2h5 gtf2h5,tf2h5,LOC107721375,LOC107659223 other downstream 420096 17233977 ~ 17236129 (-)
ttc32 ttc32 other downstream 609394 17043166 ~ 17046831 (-)
G296802 igf2r other downstream 1098298 16555103 ~ 16557927 (-)
pln NA other downstream 1513609 16134134 ~ 16142616 (-)
acot20 LOC108257587,LOC108257591 other upstream 50475 17707286 ~ 17715272 (-)
dpf3 dpf3,LOC108257599,LOC108424513,LOC107659173,LOC107721322,LOC107668213,LOC107562702,LOC107602065,LOC107756570 other upstream 415734 18072545 ~ 18105993 (-)
ubr7 LOC108257828,LOC108411326 other upstream 1413649 19070460 ~ 19083511 (-)
LOC113525604 LOC108258223 other upstream 1717962 19374773 ~ 19410374 (-)
LOC113524711 NA other upstream 1772380 19429191 ~ 19451604 (-)

Expression


Co-expression Network