akap12b (akap12)


Basic Information

Item Value
gene id akap12b
gene name akap12
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 17538910 ~ 17600760 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026923781.2
AGCCGACTTCATCCTTCTAGAAGCCAGACGACCTTCTCAGAGGCtcgtgctgctgctgctgctgctcgtgtagttttgttttgctgtttttctgctCTGTGATAACGACTTACAGCGGACGAGTGGACGAGTTCGTGCCGgttttgtttcgttttgtttgtgttttgtttttttcctccggGATGGGAGCGAGCACATCCGCGCAGCAGGACGCCAAGAGCGCCGAGGAGGAGCGCGTCGCGGACCTGAGTGAGACCCGCGGCGGCGACGATGACACTGACGACGCGAAGCAGCTGCAGAAGAATGGACAGATCTCAATCTCCAGCCTGAATGGGAAGACGGATGAGCAGACAGACTTTAACACACAAGATGAGGACGATACTTTGGCCgaggTTGGCCAAACAGAGGCCATGCCCCAGAAAGAGGACAGCCCTGAATCAATCGAGGTCCTCCAAGATGAGGTTTCACCTCAAGTTAATGGAGAGCAGGAGGAAAATGAGTGTGTCAGTGCAAATGAAACTACACCCACAGAAGAGAAAGTAGCTGAGGAGAAACCAACTGAGTCCAATGAGGTGGGTTTCAAGAAGATCTTCCGCTTTGTTGGTTTTAAGTTTACACTGAAGAAGGACAAGAATGAGAAAACAGAGCCTGTACAGCTCCTAATGGTGAAGGAAACTGAGGATGGTGCTTCAGAAGCTGTTGTTgaggaaacaaaagaggaacCTGTAAATGCAGAAATCCAGTCTGAGGATGAAAAGAAACTGGATGCTTccagaaatggagaagaggCCAGTGCTGAAGATGCTGCAAAGACTGAAACGGAACCAGACCACCCTGCAACTGATGCCCCAGCAGAAACCAAAACAGATGGTGCTGAAGAAACTGAAAAGACCCCAGCTGACGAGCCAGCTGATGAAGTGGAAGCCTCtactgagaaagagaaagaaccAGAACCGCAAGCCGAATCTCCTACATCTCCACCATCTCAAGAGACACAGTCCCCTTTCAGAAGATTCTTCACTCAGGGAATCTTCTCTAACCTGCGGAAAAAGACAAGCTTCAAGAAGGCTAAAGAGGAGGAACCAGTAAAGGAGAAATCTGCTGAGGAGGATATAAAGGAGgctgaggagagagaagaagcagcagcaggagggGAAGGACAAGGCAAGGAGGATGCAGAGGAATTGGAAACTGATGACCAGGTAGATAAAGCAGAAGCACCAGAAAAATCTGAAGCAAGCCCTGAGGAAGCTCCATCTGCCCCTGAGGAGCAAAAGGAGGAGGAACTGAAAGTGGAGGTTGAGACAGAAAGTGAAGCTGCACCAGTACAAGAGCCTGAAGCTGTTGAACAAGCTACAACTTGTGAGGTTTCAGAGACCTCTGCTGCTGAAGAAAAAGATGAGACCAAACCCACTGATGATACCAAACTTAGTGATGACAAGGCAACTGACTCTTCTGAAGAACAACTGACTCCTGAGAAATCCCCTGCAGAAACAACCACTGAAGCTGAAGTTCAGTCATCCCAAGACAAAGCCAAGGGTCAAGGGAGTCCACTGAAAAAATTGTTTACTGGGGCAGGTTTGAAGAAGTTGTCCTCCAAAAAGCAGAAGggcaaaaaagaaacagagtcAAAGCAAACAGAATCCACTGAGCAGGCAGCTGAACAGATTCAGTCGTCCACTGAGTCAGATGAGGCTCAAAAACCTGACAGTGGAGCCTCGTCTCCAGAAGAATCTGGTGAGCATGTTGTAGGTGACGCAAGTCAGGCTGAGGCCAGTGTGGAAGCTGAAGGTGAGGCAGCAACCTCTGAcagtgagaagaagaaagatggCATCCTTCATTGGGCCTCTTTCAAAAAATTAGTCACTCCAAAGAAACGTGTCAAGAGGTCATCTGAGAGTGAAGATGAGACCCCTGGAGACAAGCCAAAATCAGCCACCCTGTCCTCAACAGAGAGTGCTGTCTTCGAAGAGAAAACTGAGGAGATTAAACCAAGTGAGGAAGTAAAGGAAGAAGCAAAGGAGGAATCACCGGTTGAGGGCAAGACTGAGACAAAAGCTGAAAAGTCTGAACAAAGCACAGAGGAACCAAAGAAGAAGATTGACACCTCAGTATCCTGGGAAGCCCTTATTTGTGTGGGATCAGCTAAAAAGAGGGCCAGGAAGACTTCTGACTCTGACGATGAAGAAACTAAGATTGAGGAAGAGGTTCAGAAGTCTGGAGAAGAACAGGCCAAGACTGCAGAGTCACCTCTTGAAAGCTCACAGGAGGTTGAGCGTGAAAATTTGGCCTCTTCTCCAGAACCAGAAGGAGAGCTTGTCTCTACATGGGAGTCCTTCAAAAGGCTGGTGACACAACGTAAGAAACCCAAGGCTGAAGACAAGTCTGATGAAGTGCAGGGTCCAGAGCAGGCAGCATCTGACAGTGAACTACCCAAAGAGGAGTCATCTTTCTCCCTTAGAAAACTAATTCCCCGCAGAAAGAAGAAGTCTGATGCTAAACAAGGGCAGGCATCTTCTGATGTTGGATCTGCAGAAGAAGACTCTGACACACCTGCTGTGGTACCTCTGTCAGAGTATGACAACGAAAAATCAGAGAAGGCTACAGAGGAAGAAACAAAGACAGAGGAGGCAAAGCCAGAGGTCACACCTGTCACTCCAGTCACTCCTGGAAAAGCCTCAGCTGAGGACAGATCTCCATCTTGGATCTCAGCTACTGTGGAGAATGTTGAAGATGAGGCAGAGGGAAAGCCACTAAGTGACATACCTGAAGAAGGAGATACAGCTGCTACACCTAAATCAGCTGATAACACCATTGTGGAGGACATCATAGAGTTTACATCAGAAGCTGTCACTGCCATTGAGCCAGCAGAGGAAACAGAAATGGTTTCTGCTCTATCACGCATCACAGAGTCACCCATTACATCTGGTGAGACTTCACCAGTACCAGATGATGGTGTGGTGAACAAGGCTGAAGCCATTTTACAAGAAGCTGTGGAAACTATCAATATTACATCAAGTGCAGTGGCTGTCACAGTAACAGAAGAGCAGACAAAAAGAATGGCTGTCACTACAAGCCCATTCCAGATTGAGTCAGCCATTAAGGAGGAGAAAGTGGTCTTGGCTGTTCATGAGAAAACTGAAGCAATATCCATCTGCACAGGCCTTGACACCAGTGAAATTAAAGCTGTAGAAGAAGAGAGTCCTTTGAAGTCTACAGTGGAAGCTGTCACCACTGTCAGCCAGGCACTGTCTATAGAGGTGGCTGCTGAGGATCACACTTTAAAACCTGAAGAAGCTGAAGTGGCAGAAGACAAAATTTTTGTGGCACAGGTTAACGAAGTTCAAACTGAGTGCAAAGAAGAGCCTCCAGTCTCTGTAGAAAATACTGTAGAGGAAACTGTAGAGGTTAAGACTACGAATGAGTTCCAGGAAGCAGTCAAAGTGGCAGTGGTCACAGCAATTCAACAGGAGATAGAGATTCTTGAGGAGCCAGTAGTCACAGAAAACACTCCAAAGGTGGTGCCAGAGAGCCCTGTTGAATCAACTGTAGAACAGCCAGTCTGTGCTCAGACAGTAGAGATCACTGAAGTTACTGCTGCTGAAGGGGAGGTGCAGGAGAAAGACGTTAAAGAATCAGTCACCAGTGCTGAGGTAGTATCTGTAGAAGTAGCAGGGGCTGTGTCAGAAGAAGTTACAACATCACTTGCAGATACCCTTGTACCTGAGACAACCATGTCTCAGGAAGATCCCATCCCTGTCCTGGCTGCAACAGAGGAGGCTGCAGTAACAGAAGAGATTGTCTGTGTTTGCCCACCCTCAGAAactaaaacagaagaagaaataaaggtTGTTATGGAGAGCGTTTTAACCACTCAAGTCCACATTACCACAGATGTTGAGGTTGTCTCAGCAAGCGTTTGTGTTGAGGAAAACATTGAAGTTGCATCATCAAGTGTCAGTCCTGTGATTGAGGAAACATGTaagaaagatgaagaagaagtggAAGCAATGCATCTGAAAGAAGCAGAAGCCATTCAGGAACAGAGCACAGTCATTGTTCAGGAAGTCCTTCAAAATGTTGTTGAGAACCTCAGTGAAATGCACATGGGACAAGAGTTAGAAGAGAAGCCTGTGGAGGAGATTGACACAGCAAAACCTGAGGAGGTCCCATCTGTAGCTGAGGAGGAAAAATTGTCACAGGATGCACCAGTCACAGAAGAAAAATTTACAGCAGATACACAAATTCAAGAAGAAACAAAGCCTGAGACTGAGAACAAAGCTGAAGAAGAACCGACCCAGGTCATTACTGAGAGTTTGCCAGTCAATGAAGCCATTCAGATTTCTGAAATAGTTCTGGTTGCTATGACAGAAGAAATTAAAGCTCAGGAGGAAGAGGTGTCCTCAGTCTCTGTGGAAGCAACACAACTATGTACAGATGTAGTAAAGCAGGAAGTGGAATTGAAGGAAGGTGAAAAGAAGGTAGAGGATGACAAATCAGTCACCACAGAAAGCGAAGATGGGAAATGTCAAGCTGAGAAAGATCAAAATGAAGAACCAAGTGGAACCACAGAGACACCAGCTTCAGAGGAAAGCAGTCAAACGCAAACCGTCACTCTTGTAAGCGTAAAGCATGCTCAGGTTGTTGAGGAAGAGAGTCAGCAGATCCAAGACATGAAGACTGAGACAGCGACAGAGATCAATGTTGGCATCATACATGTGGTGGAAGCAGATGAAAGAGCAACGCAAGACACTGAAATTGCCGTGAAAGAAGACAGCACCAAGAGTCAGGAGCCATCAAAAGATATGCCTCAAACAGACTTGGAAGAGGCACAAAAGGATATTTCAGCACCAGACATGAAAGGCCAGGAGGGGTCCGGAGATCCTGACTGTCAGAAGACAGATGCTGAAGCCAGTGAGGTGAAAACAGCTGCTGAGGACACACCAAAAGCCACTAAGGAAGAGGACATGGAGAAAGAGATTGTCACCGTCACCACAGAGACTGCTACAGAGTCATGAGCCAGCTACACGTGTCAGGTGGTTGCATGGGAAGCTCCTGTAGAAGATACAGGAACAGAAGAAAGAGCCAGAGactcatccatctatccatccatccatccatctatcctaCAACATGTTTTCGTAATGTCTACGTTCCAGCCCACTTTGAGAAATTTCTATCCACAGCATCACACCATGACTCAGATGGGTTCAGATGTCACTCATCTCACATTGAGCgtttttgttttctgacattttattCTCACAGAGGTGTTGCTGTGTCATGAAGGGCTGCTGTCAGAtggagagaaatgtgtgtgtatgtgctttatgtgtgtgtgagatcctatcttgtatattgtatttatatctaaaatattcTGTCATCCCAACCTTGTCCTAAACGGCCTGGAAATGGATGACATCACCCAGATacaaggttgtttttttttttttatttacgaAACATGGTACACGTGTGCAGTTAAGCGTCAGAGTGTTTGAGAGCCAGCATAATCATTTCCATTcctactgtacatatatatcatatataaaaCATGCTTTATTTCTCGACTGTGAAACTcgtgaaacttttttttttgtagttctCCTGTGTTTGAGAAGCACATGCTATCAGTAAAACACTGCTTTCACCTTTAATATGTGAATGAATGGTTAGATTTTGGTATTAAATGAGATTTGACAGCACTGTTCGGTGGCACGTGAAGTACAGTATGTATTCTTTACTGTTTCTAAGTTGTTATTAGATATTCAAAAAGTATTGCTGAGTGCACTGGCGCCATCTACCGGAAGCCAGTTTTTATGAAATTAATTTGCGTTCACAATtcatgtgtgttagtgttgtttttttgtttgttttttttttttacaaacattgtTCATATCGCGCTCACAGCGTTTGTATTTTTCATCTGTGTATCATAAACTAACAATATTACTCCTTCCAGTGATGATCACctttaataacaatttattcacaatttacattttttttaaactacattcTTTTAGTGCTTAGATGCATGAGATCTGAACAAAGCAGAACTGAGATTTGCAATCAGCGTGTATATGCAAAGCATCGCATCACTCgttcattaaattcattaaGGTCACCTTTGTAATCCTGCTGAttataaaatgcaatataaaatgTCTCAGTGATACAGCAGTGACTATCAGTGTTCTTGTTCTTGAGGCAAATTAGAGGATGTGAGAATCTCTGCAAAGAtgctttattttgttaaaatagaaaaagaatgtTCTTCTATCATCACAGCTTGTATGAAACCCCTGGGTCGCATCCTGTTCTctgctttttataaaaaaaaatattactgtgAAGCTCCTTAACATTTGTACAAATTGTATACCTATGTATCTTAAATcatattgtaatattaaataacCAATGAGAGCATTAGACAATGTTATGTAGCATGatcttctctgtttttttgtttttttttaatttgtcaagCTGTTAATAGTATG

Function

symbol description
akap12 Enables adenylate cyclase binding activity. Involved in adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway and regulation of protein kinase A signaling. Located in cytosol and plasma membrane. Implicated in chronic kidney disease; colorectal carcinoma; and juvenile myelomonocytic leukemia.

NR:

description
PREDICTED: A-kinase anchor protein 12 isoform X1

GO:

id name namespace
GO:0032060 bleb assembly biological_process
GO:0000902 cell morphogenesis biological_process
GO:0035024 negative regulation of Rho protein signal transduction biological_process
GO:0009887 animal organ morphogenesis biological_process
GO:0060028 convergent extension involved in axis elongation biological_process
GO:0048471 perinuclear region of cytoplasm cellular_component

KEGG:

id description
K16528 AKAP12; A-kinase anchor protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026923781.2 True 6512 mRNA 0.44 5 17538910 17600760

Neighbor

gene id symbol gene type direction distance location
armt1 armt1 coding downstream 18199 17512447 ~ 17520711 (-)
myct1a myct1 coding downstream 279044 17256381 ~ 17259866 (-)
serac1 serac1,LOC107555766 coding downstream 289989 17237824 ~ 17248921 (-)
si:dkey-12h9.6 LOC108258171,LOC103045157,LOC108424494,LOC105908978 coding downstream 306812 17216213 ~ 17232098 (-)
capn3b LOC108257553,LOC108424491 coding downstream 345263 17168187 ~ 17193647 (-)
mthfd1l mthfd1l,si:ch211-266i18.6,LOC107721348,LOC107659212,LOC107665399 coding upstream 7831 17608591 ~ 17666128 (-)
gpr176 gpr176,LOC102785786 coding upstream 83237 17683997 ~ 17699560 (-)
LOC113532304 LOC108257600 coding upstream 159859 17760619 ~ 17767511 (-)
LOC113531908 NA coding upstream 167784 17768544 ~ 17775954 (-)
fntb fntb,LOC108257588,LOC108424508,LOC107756604,LOC107668263,LOC107721314,LOC107671778,LOC106571088,LOC105024336 coding upstream 207538 17808298 ~ 17825400 (-)
G297442 NA non-coding downstream 56023 17482324 ~ 17482887 (-)
LOC113531886 NA non-coding downstream 117458 17415966 ~ 17421452 (-)
G297053 NA non-coding downstream 456796 17081872 ~ 17082114 (-)
G297052 NA non-coding downstream 472482 17065682 ~ 17066428 (-)
G297050 NA non-coding downstream 474525 17064166 ~ 17064385 (-)
G297465 NA non-coding upstream 55465 17656225 ~ 17656811 (-)
G297670 NA non-coding upstream 104840 17705600 ~ 17760410 (-)
G297712 NA non-coding upstream 240801 17841561 ~ 17842853 (-)
G297718 NA non-coding upstream 254125 17854885 ~ 17953471 (-)
G297720 NA non-coding upstream 264528 17865288 ~ 17865651 (-)
esr1 esr1 other downstream 32252 17485584 ~ 17506658 (-)
gtf2h5 gtf2h5,tf2h5,LOC107721375,LOC107659223 other downstream 302781 17233977 ~ 17236129 (-)
ttc32 ttc32 other downstream 492079 17043166 ~ 17046831 (-)
G296802 igf2r other downstream 980983 16555103 ~ 16557927 (-)
pln NA other downstream 1396294 16134134 ~ 16142616 (-)
acot20 LOC108257587,LOC108257591 other upstream 106526 17707286 ~ 17715272 (-)
dpf3 dpf3,LOC108257599,LOC108424513,LOC107659173,LOC107721322,LOC107668213,LOC107562702,LOC107602065,LOC107756570 other upstream 471785 18072545 ~ 18105993 (-)
ubr7 LOC108257828,LOC108411326 other upstream 1469700 19070460 ~ 19083511 (-)
LOC113525604 LOC108258223 other upstream 1774013 19374773 ~ 19410374 (-)
LOC113524711 NA other upstream 1828431 19429191 ~ 19451604 (-)

Expression


Co-expression Network