RNA id: XM_043246234.1


Basic Information

Item Value
RNA id XM_043246234.1
length 1333
RNA type mRNA
GC content 0.39
exon number 8
gene id mad2l2
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11169602 ~ 11172533 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCACAGCCATAGAGCTTTGTTATTCTCTTACAGATTGCAGAAGAAAAGTGTAAACATCCTTCGagctgtattttattaaataaatgtttgtttatttactgtttatttgtgGATGACAGACGTTTTCACAATAGTCGGGCTTTGTGTATTACAGTAATAGATTTCGCGGAGAACGTGTTTAcggttttttttctgaatacaAGACTCGATCGTCCTGGAGCAGGCATGCATGATAGGTGATATTTTGTAAACGAGACGCTGCTCTTTTAGTTAAAGGTTGTTCCGTGTATTTTGGTAACTTCGCTATGACCACTCTGACGAGGCAGGATCTTAATTTTGGCCAAGTTGTGGCTGACATTCTGTGTGAGTTTTTGGAAGTGGCCATTCACCTCATCCTATACGTCAGAGAGATTTATCCATCTGGCATTTTTCAGAAAAGGAAGAAATACAACGTGCCTGTGCAGATGTCATGTCATCCTGAGTTAAATCAGTACATTCAAGACACGCTCCACTGTGTCAAGCCACTGATAGAGAAGAACGAGGCTGAGAAGGTTGTAGTTGTGATTATGGATAAAGAGCACCATCCAGTGGAGAGATTTGTGTTTGAGATCTCACAGCCTCCACTTCTGTCCATCAACTCGGAGACTCTGCTGTCTCACGTGGAGCAGCTGCTGAGAGCTATGATCCTgaaaatcagtgtgtgtgacgCTGTTCTAGACAACAATCCTGCAGGATGCACATTCACAGTATTGGTGCACACGAGGGAAGCTGCCACAAGGAACATGGAAAAAGTTCAGGTCATCAAGGATTTTCCATGGATCGTAGCAGACGAGCAGGAAGTTCACATGGAAGAGGCAAAGCTCATTCCTCTCAAAACGATGACTTCTGATATTCTCAAGATGCAGCTGTATGTAGAAGAAAGAACACAGAAAACTTGATGCCCTGCAAACACATCTACAGGTGTTTACAACAGGAAgcaccttttttctttttctttttttaatttaataacaaacttaAGTTGCATTAGGATAACATAGTAGAAGCATATTATACTGGATcttgcattttattaagtaGAACTATTAGTATATCCAtatcttttacttttatttttttattgcatttttgcttATTCTGAAATTGCCctgtttgataaaaaaaatacagttttgtgaTCTTTCACTGCTCTACCTCCGTCTTGCCTCCAGAAACGTTTACAAAATGAGATGTGGGAGTATTGTCTGttcattataatgaatgcatcaaCTGACGCTATCGAACTGAACCTCATTTTTAATCTTTGCCCTAATAAAGTCAAAGAAAATCTGAA

Function

GO: NA

KEGG:

id description
K13728 MAD2L2; mitotic spindle assembly checkpoint protein MAD2B

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93119 lncRNA upstream 26506 10971712 ~ 11143096 (+) False G62896
TU93120 lncRNA upstream 26506 10971712 ~ 11143096 (+) True G62896
TU93122 lncRNA upstream 195636 10973247 ~ 10973966 (+) True G62897
TU93123 lncRNA upstream 195636 10973247 ~ 10973966 (+) False G62897
TU93081 lncRNA upstream 350185 10819217 ~ 10819417 (+) True G62873
XR_006251601.1 lncRNA downstream 31296 11203829 ~ 11204547 (+) True LOC122350460
TU93131 lncRNA downstream 71104 11243637 ~ 11248294 (+) True G62904
TU93265 lncRNA downstream 178778 11351311 ~ 11392665 (+) True G62996
TU93268 lncRNA downstream 178778 11351311 ~ 11394149 (+) False G62996
TU93322 lncRNA downstream 269905 11442438 ~ 11445008 (+) True plp2a
XM_043247979.1 mRNA upstream 3469 11160735 ~ 11166133 (+) True LOC122351105
XM_043247374.1 mRNA upstream 141765 10991504 ~ 11027837 (+) True LOC122350694
XM_043246748.1 mRNA upstream 198833 10968059 ~ 10970769 (+) True b3gnt7l
XM_043246749.1 mRNA upstream 204879 10962188 ~ 10964723 (+) True dffb
XM_043247894.1 mRNA upstream 464060 10659401 ~ 10705542 (+) True LOC122351050
XM_043247866.1 mRNA downstream 773 11173306 ~ 11183775 (+) True LOC122351035
XM_043246880.1 mRNA downstream 11991 11184524 ~ 11187447 (+) False LOC122350429
XM_043246882.1 mRNA downstream 12064 11184597 ~ 11187447 (+) True LOC122350429
XM_043246879.1 mRNA downstream 20191 11192724 ~ 11197803 (+) True LOC122350428
XM_043246937.1 mRNA downstream 27338 11199871 ~ 11203803 (+) True LOC122350458
TU92799 other upstream 690803 10468874 ~ 10478799 (+) True G62692
TU92796 other upstream 729106 10431802 ~ 10440496 (+) False G62692
TU92869 other upstream 816489 10348959 ~ 10353113 (+) False col2a1a
TU92500 other upstream 1463963 9704481 ~ 9705639 (+) True G62483
TU91548 other upstream 3640534 7524635 ~ 7529068 (+) False soat1
XR_006251600.1 other downstream 20191 11192724 ~ 11197803 (+) False LOC122350428
TU93183 other downstream 122272 11294805 ~ 11311433 (+) True G62940
TU93395 other downstream 389748 11562281 ~ 11564408 (+) False ppdpfa
unassigned_transcript_1294 other downstream 615820 11788353 ~ 11788424 (+) True trnah-gug_22
unassigned_transcript_1296 other downstream 625055 11797588 ~ 11797660 (+) True trnar-acg_41

Expression Profile