Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00013376 |
| length | 1193 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 2 |
| gene id | XLOC_005723 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007124.7 |
| NCBI id | CM002897.2 |
| chromosome length | 52186027 |
| location | 2943281 ~ 2944990 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0044425 | obsolete membrane part | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0071944 | cell periphery | cellular_component |
| GO:0043235 | receptor complex | cellular_component |
| GO:0005253 | anion channel activity | molecular_function |
| GO:0005254 | chloride channel activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00013541 | lncRNA | upstream | 14826 | 2923920 ~ 2928455 (+) | False | XLOC_005722 |
| TCONS_00013542 | lncRNA | upstream | 14826 | 2924831 ~ 2928455 (+) | True | XLOC_005722 |
| TCONS_00013540 | lncRNA | upstream | 266945 | 2671432 ~ 2676336 (+) | True | XLOC_005715 |
| TCONS_00011324 | lncRNA | upstream | 532376 | 2394622 ~ 2410905 (+) | True | XLOC_005711 |
| TCONS_00011318 | lncRNA | upstream | 590286 | 2352289 ~ 2352995 (+) | True | XLOC_005708 |
| TCONS_00011344 | lncRNA | downstream | 314553 | 3259543 ~ 3260961 (+) | True | XLOC_005725 |
| TCONS_00013543 | lncRNA | downstream | 674276 | 3619266 ~ 3620828 (+) | True | XLOC_005726 |
| TCONS_00011350 | lncRNA | downstream | 887580 | 3832570 ~ 3843692 (+) | True | XLOC_005727 |
| TCONS_00011353 | lncRNA | downstream | 950373 | 3895363 ~ 3907894 (+) | False | XLOC_005729 |
| TCONS_00011354 | lncRNA | downstream | 950413 | 3895403 ~ 3907897 (+) | True | XLOC_005729 |
| TCONS_00011342 | mRNA | upstream | 29382 | 2908764 ~ 2913899 (+) | True | XLOC_005721 |
| TCONS_00011341 | mRNA | upstream | 41574 | 2894536 ~ 2901707 (+) | True | XLOC_005720 |
| TCONS_00011340 | mRNA | upstream | 51270 | 2861265 ~ 2892011 (+) | True | XLOC_005719 |
| TCONS_00011339 | mRNA | upstream | 71406 | 2861265 ~ 2871875 (+) | False | XLOC_005719 |
| TCONS_00011337 | mRNA | upstream | 93424 | 2830574 ~ 2849857 (+) | True | XLOC_005717 |
| TCONS_00011343 | mRNA | downstream | 307960 | 3252950 ~ 3258772 (+) | True | XLOC_005724 |
| TCONS_00011345 | mRNA | downstream | 722240 | 3667230 ~ 3755361 (+) | False | XLOC_005727 |
| TCONS_00011346 | mRNA | downstream | 722243 | 3667233 ~ 3821558 (+) | False | XLOC_005727 |
| TCONS_00011347 | mRNA | downstream | 722243 | 3667233 ~ 3826370 (+) | False | XLOC_005727 |
| TCONS_00011348 | mRNA | downstream | 722243 | 3667233 ~ 3832831 (+) | False | XLOC_005727 |
| TCONS_00011338 | other | upstream | 110074 | 2833092 ~ 2833207 (+) | True | XLOC_005718 |
| TCONS_00011320 | other | upstream | 556748 | 2386413 ~ 2386533 (+) | True | XLOC_005710 |
| TCONS_00011310 | other | upstream | 1177659 | 1765507 ~ 1765622 (+) | True | XLOC_005701 |
| TCONS_00011289 | other | upstream | 2093855 | 844143 ~ 849426 (+) | False | XLOC_005684 |
| TCONS_00011277 | other | upstream | 2432142 | 502319 ~ 511139 (+) | True | XLOC_005673 |
| TCONS_00011360 | other | downstream | 1017777 | 3962767 ~ 3966255 (+) | True | XLOC_005731 |
| TCONS_00011389 | other | downstream | 3040786 | 5985776 ~ 6001981 (+) | True | XLOC_005757 |
| TCONS_00011399 | other | downstream | 3469294 | 6414284 ~ 6414400 (+) | True | XLOC_005764 |
| TCONS_00011412 | other | downstream | 4436528 | 7381518 ~ 7381633 (+) | True | XLOC_005774 |
| TCONS_00011427 | other | downstream | 5361677 | 8306667 ~ 8317874 (+) | True | XLOC_005783 |
