RNA id: TCONS_00013082


Basic Information

Item Value
RNA id TCONS_00013082
length 116
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_006797
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 36399260 ~ 36399375 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

aacCACAGCCATTTCACCCTGTAGCCCAaaaccagttactcactgaagccaagcaTGGCTGAGCTTGGTTAGTACCAGGATGGGTGACCACATgcaaaactaggttgctgttggac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000177699

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013080 lncRNA downstream 76656 36321364 ~ 36322604 (-) False XLOC_006796
TCONS_00013872 lncRNA downstream 473776 35925042 ~ 35925484 (-) True XLOC_006784
TCONS_00013044 lncRNA downstream 871855 35520974 ~ 35527405 (-) True XLOC_006778
TCONS_00013869 lncRNA downstream 1109823 35205297 ~ 35289437 (-) False XLOC_006774
TCONS_00013088 lncRNA upstream 130855 36530230 ~ 36535072 (-) False XLOC_006800
TCONS_00013091 lncRNA upstream 132185 36531560 ~ 36532726 (-) False XLOC_006800
TCONS_00013096 lncRNA upstream 169572 36568947 ~ 36582281 (-) False XLOC_006803
TCONS_00013099 lncRNA upstream 188395 36587770 ~ 36612159 (-) True XLOC_006804
TCONS_00013101 lncRNA upstream 213787 36613162 ~ 36621925 (-) True XLOC_006805
TCONS_00013078 mRNA downstream 7758 36321088 ~ 36391502 (-) False XLOC_006796
TCONS_00013077 mRNA downstream 7764 36321088 ~ 36391496 (-) False XLOC_006796
TCONS_00013076 mRNA downstream 79952 36311894 ~ 36319308 (-) True XLOC_006795
TCONS_00013075 mRNA downstream 134399 36196778 ~ 36264861 (-) True XLOC_006794
TCONS_00013073 mRNA downstream 214559 36164639 ~ 36184701 (-) False XLOC_006793
TCONS_00013083 mRNA upstream 6899 36406274 ~ 36439061 (-) False XLOC_006798
TCONS_00013084 mRNA upstream 9938 36409313 ~ 36418921 (-) True XLOC_006798
TCONS_00013085 mRNA upstream 46812 36446187 ~ 36525982 (-) True XLOC_006799
TCONS_00013087 mRNA upstream 127431 36526806 ~ 36534380 (-) False XLOC_006800
TCONS_00013086 mRNA upstream 127431 36526806 ~ 36534380 (-) False XLOC_006800
TCONS_00013079 other downstream 7769 36321091 ~ 36391491 (-) False XLOC_006796
TCONS_00013081 other downstream 68361 36321431 ~ 36330899 (-) True XLOC_006796
TCONS_00013072 other downstream 257909 36135416 ~ 36141351 (-) True XLOC_006792
TCONS_00013058 other downstream 436794 35962350 ~ 35962466 (-) True XLOC_006785
TCONS_00013051 other downstream 556671 35826667 ~ 35842589 (-) True XLOC_006781
TCONS_00013090 other upstream 131045 36530420 ~ 36535072 (-) False XLOC_006800
TCONS_00013107 other upstream 358180 36757555 ~ 36761316 (-) True XLOC_006809
TCONS_00013121 other upstream 779227 37178602 ~ 37178716 (-) True XLOC_006819
TCONS_00013139 other upstream 1195140 37594515 ~ 37600539 (-) False XLOC_006831
TCONS_00013140 other upstream 1199336 37598711 ~ 37599245 (-) True XLOC_006831

Expression Profile

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