RNA id: TU46037



Basic Information


Item Value
RNA id TU46037
length 256
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G40564
representative True

Chromosome Information


Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7425711 ~ 7425966 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TACAAATAGAATTGATGACTTAAATGGCCCTTAAAAACCAGATAAGGCAAACCACAACCATAAAACAACAGCTGAATTTTATCTTTGCATGTCACGCCCTGCTGGAAAGCAGTACTACCTGCAGCTTATGGCAGTTTACCCAGCAGTCAGTGCGTCTGACAGACGTACACCTGCAGATGGCGGGAACATTTAATCCTCAGGGACAGATGAGAGAGATGAAGAGAAACATTAAACCTGTCAGTTTCAGGAAGTCAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46016 lncRNA downstream 32989 7385460 ~ 7392722 (-) True G40543
TU46026 lncRNA downstream 56509 7368986 ~ 7369202 (-) True G40553
TU46024 lncRNA downstream 60557 7364797 ~ 7365154 (-) True G40551
TU46023 lncRNA downstream 61623 7363876 ~ 7364088 (-) True G40550
TU46012 lncRNA downstream 82507 7338826 ~ 7343204 (-) True G40539
TU46039 lncRNA upstream 1733 7427699 ~ 7427912 (-) True G40566
TU46060 lncRNA upstream 32855 7458821 ~ 7468238 (-) True G40580
TU46065 lncRNA upstream 55557 7481523 ~ 7481722 (-) True G40585
TU46066 lncRNA upstream 58358 7484324 ~ 7484523 (-) True G40586
TU46084 lncRNA upstream 174579 7600545 ~ 7602965 (-) True G40602
CI01000005_07398684_07399164.mRNA mRNA downstream 26547 7398487 ~ 7399164 (-) True CI01000005_07398684_07399164
CI01000005_07373961_07374634.mRNA mRNA downstream 51077 7373410 ~ 7374634 (-) True CI01000005_07373961_07374634
CI01000005_07355833_07360372.mRNA mRNA downstream 65339 7355833 ~ 7360372 (-) True CI01000005_07355833_07360372
CI01000005_07190084_07218097.mRNA mRNA downstream 207578 7189596 ~ 7218133 (-) True CI01000005_07190084_07218097
CI01000005_07143500_07144465.mRNA mRNA downstream 281146 7143482 ~ 7144565 (-) True CI01000005_07143500_07144465
CI01000005_07436839_07437813.mRNA mRNA upstream 10099 7436065 ~ 7438424 (-) True CI01000005_07436839_07437813
CI01000005_07591912_07592984.mRNA mRNA upstream 165946 7591912 ~ 7592991 (-) True CI01000005_07591912_07592984
CI01000005_07593934_07596058.mRNA mRNA upstream 167960 7593926 ~ 7596058 (-) True CI01000005_07593934_07596058
CI01000005_07617632_07620944.mRNA mRNA upstream 191599 7617565 ~ 7620944 (-) True CI01000005_07617632_07620944
CI01000005_07622471_07624184.mRNA mRNA upstream 195374 7621340 ~ 7624184 (-) True CI01000005_07622471_07624184
TU45920 other downstream 229283 7195795 ~ 7196428 (-) True G40487
TU45564 other downstream 942222 6480689 ~ 6483489 (-) True G40190
TU44763 other downstream 1591172 5833792 ~ 5834539 (-) True G39515
TU44762 other downstream 1591319 5833792 ~ 5834392 (-) False G39515
TU43542 other downstream 3024601 4381238 ~ 4401110 (-) True G38415
TU46013 other upstream 100255 7526221 ~ 7532148 (-) True G40540

Expression Profile