RNA id: TU174046



Basic Information


Item Value
RNA id TU174046
length 214
lncRNA type antisense_over
GC content 0.34
exon number 1
gene id G153256
representative True

Chromosome Information


Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2748097 ~ 2748310 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAAAGCAAAGGATTTATTTGGGTATAAAAGCATCTGCCAAATGAATAAATTGAAACAAGTATGTATGTTAGCATGCATGTTTGAACTTTGTCCAGCTCTCATGTATAGTTTCACCACAGCTATTTCCTATATTCTCCACAGAAACCATAATTATGGGAGAAAATGGGAAAACATTACTTTTACTTGCGGTTCTATGAAGTGGTGTATTCTGTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU174041 lncRNA downstream 17322 2730555 ~ 2730775 (-) True G153251
TU174040 lncRNA downstream 17936 2729894 ~ 2730161 (-) True G153250
TU174038 lncRNA downstream 21673 2726135 ~ 2726424 (-) True G153248
TU174035 lncRNA downstream 24257 2723608 ~ 2723840 (-) True G153245
TU174034 lncRNA downstream 25504 2722297 ~ 2722593 (-) True G153244
TU174049 lncRNA upstream 64813 2813123 ~ 2814507 (-) True G153259
TU174067 lncRNA upstream 68292 2816602 ~ 2817026 (-) True G153277
TU174069 lncRNA upstream 74089 2822399 ~ 2822630 (-) True G153279
TU174070 lncRNA upstream 74754 2823064 ~ 2823301 (-) True G153280
TU174071 lncRNA upstream 76762 2825072 ~ 2825289 (-) True G153281
CI01000029_02742245_02743081.mRNA mRNA downstream 3873 2741953 ~ 2744224 (-) True CI01000029_02742245_02743081
CI01000029_02738375_02739517.mRNA mRNA downstream 7858 2738054 ~ 2740239 (-) True CI01000029_02738375_02739517
CI01000029_02593889_02603627.mRNA mRNA downstream 144470 2593391 ~ 2603627 (-) True CI01000029_02593889_02603627
CI01000029_02589994_02592379.mRNA mRNA downstream 155718 2588450 ~ 2592379 (-) False CI01000029_02589994_02592379
CI01000029_02539755_02540836.mRNA mRNA downstream 206692 2539729 ~ 2541405 (-) False CI01000029_02539755_02540836
CI01000029_02753815_02761288.mRNA mRNA upstream 5438 2753748 ~ 2761527 (-) True CI01000029_02753815_02761288
CI01000029_02762066_02762926.mRNA mRNA upstream 13297 2761607 ~ 2763768 (-) True CI01000029_02762066_02762926
CI01000029_02764957_02770946.mRNA mRNA upstream 16647 2764957 ~ 2771393 (-) True CI01000029_02764957_02770946
CI01000029_02837412_02857934.mRNA mRNA upstream 88453 2836763 ~ 2857940 (-) True CI01000029_02837412_02857934
CI01000029_02957572_02962601.mRNA mRNA upstream 209117 2957427 ~ 2963354 (-) True CI01000029_02957572_02962601
TU173923 other downstream 155295 2592459 ~ 2592802 (-) True G153138
TU173481 other downstream 1453974 1292249 ~ 1294123 (-) True CI01000029_01293143_01293964
TU174756 other upstream 500467 3248777 ~ 3286554 (-) True G153891
TU174823 other upstream 957913 3706223 ~ 3707252 (-) True CI01000029_03698769_03707177
TU175091 other upstream 1712033 4472400 ~ 4477212 (-) True G154201
TU175317 other upstream 2237798 4986108 ~ 4987425 (-) False G154415
TU175314 other upstream 2237875 4986185 ~ 4987425 (-) True G154415