RNA id: TU174067


Basic Information

Item Value
RNA id TU174067
length 425
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G153277
representative True

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2816602 ~ 2817026 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCATATAATTAGAATATCATCAAAAAGTTGATTTCACTAATTCCATTCAAAAAGTGAAACTTGTATATTATATTCATTCATTACACACAGACTGATATATTTCAAATGTTTATTTCTTTTAATTTTGATGATTATAACTGACAACTAAGGAAAATCCCAAATTCAGTATCTCAGAAAATTAGAATATTACTTAAGACCAATACAAAGAAAGGATTTTTAGAAATCTTGGCCAACTAAAAAGTATGAACATGAAAAGTATGAGCATGTACAGCACTCAATACTTAGTTGGGGATCCTTTTGCCTGAATTACTGCAGCAATGCGGCGTGGCTTGGAGTCGATCAGTCTGTGGCACTGCTCAGGTGTTATAAGAGCCCAGGTTGCTCTGATAGTGGTCTTCAGCTCTTCTGCATTGTTGGGTCTGGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU174049 lncRNA downstream 2095 2813123 ~ 2814507 (-) True G153259
TU174046 lncRNA downstream 68292 2748097 ~ 2748310 (-) True G153256
TU174041 lncRNA downstream 85827 2730555 ~ 2730775 (-) True G153251
TU174040 lncRNA downstream 86441 2729894 ~ 2730161 (-) True G153250
TU174038 lncRNA downstream 90178 2726135 ~ 2726424 (-) True G153248
TU174069 lncRNA upstream 5373 2822399 ~ 2822630 (-) True G153279
TU174070 lncRNA upstream 6038 2823064 ~ 2823301 (-) True G153280
TU174071 lncRNA upstream 8046 2825072 ~ 2825289 (-) True G153281
TU174072 lncRNA upstream 12232 2829258 ~ 2829463 (-) True G153282
TU174073 lncRNA upstream 18246 2835272 ~ 2835498 (-) True G153283
CI01000029_02764957_02770946.mRNA mRNA downstream 45209 2764957 ~ 2771393 (-) True CI01000029_02764957_02770946
CI01000029_02762066_02762926.mRNA mRNA downstream 52834 2761607 ~ 2763768 (-) True CI01000029_02762066_02762926
CI01000029_02753815_02761288.mRNA mRNA downstream 55075 2753748 ~ 2761527 (-) True CI01000029_02753815_02761288
CI01000029_02742245_02743081.mRNA mRNA downstream 72378 2741953 ~ 2744224 (-) True CI01000029_02742245_02743081
CI01000029_02738375_02739517.mRNA mRNA downstream 76363 2738054 ~ 2740239 (-) True CI01000029_02738375_02739517
CI01000029_02837412_02857934.mRNA mRNA upstream 19737 2836763 ~ 2857940 (-) True CI01000029_02837412_02857934
CI01000029_02957572_02962601.mRNA mRNA upstream 140401 2957427 ~ 2963354 (-) True CI01000029_02957572_02962601
CI01000029_03382508_03395312.mRNA mRNA upstream 565324 3382350 ~ 3395312 (-) True CI01000029_03382508_03395312
CI01000029_03397097_03444565.mRNA mRNA upstream 579113 3396139 ~ 3444565 (-) True CI01000029_03397097_03444565
CI01000029_03503783_03509429.mRNA mRNA upstream 686637 3503663 ~ 3509429 (-) True CI01000029_03503783_03509429
TU173923 other downstream 223800 2592459 ~ 2592802 (-) True G153138
TU173481 other downstream 1522479 1292249 ~ 1294123 (-) True CI01000029_01293143_01293964
TU174756 other upstream 431751 3248777 ~ 3286554 (-) True G153891
TU174823 other upstream 889197 3706223 ~ 3707252 (-) True CI01000029_03698769_03707177
TU175091 other upstream 1643317 4472400 ~ 4477212 (-) True G154201
TU175317 other upstream 2169082 4986108 ~ 4987425 (-) False G154415
TU175314 other upstream 2169159 4986185 ~ 4987425 (-) True G154415

Expression Profile