RNA id: TCONS_00002048


Basic Information

Item Value
RNA id TCONS_00002048
length 116
RNA type rRNA
GC content 0.47
exon number 1
gene id XLOC_001259
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 26350526 ~ 26350641 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

aacttatgcgttttcaaactaaaacgcattagtgtaaacagggcctaaagctaagcagggctgagcctgggcagtaactggatgggagaccacatgggaaaactaggttgctgttg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176681

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00002953 lncRNA downstream 102239 26243505 ~ 26248287 (-) True XLOC_001257
TCONS_00003420 lncRNA downstream 164806 26183399 ~ 26185720 (-) False XLOC_001256
TCONS_00003419 lncRNA downstream 164806 26183399 ~ 26185720 (-) False XLOC_001256
TCONS_00002019 lncRNA downstream 486887 25862966 ~ 25863639 (-) True XLOC_001247
TCONS_00003418 lncRNA downstream 636032 25709312 ~ 25714494 (-) False XLOC_001245
TCONS_00002053 lncRNA upstream 44475 26395116 ~ 26398289 (-) True XLOC_001260
TCONS_00002954 lncRNA upstream 204239 26554880 ~ 26595059 (-) True XLOC_001263
TCONS_00002955 lncRNA upstream 222788 26573429 ~ 26574741 (-) False XLOC_001264
TCONS_00002058 lncRNA upstream 222794 26573435 ~ 26575260 (-) True XLOC_001264
TCONS_00002061 lncRNA upstream 311836 26662477 ~ 26663423 (-) True XLOC_001265
TCONS_00002043 mRNA downstream 55531 26250729 ~ 26294995 (-) False XLOC_001258
TCONS_00002047 mRNA downstream 57323 26289358 ~ 26293203 (-) True XLOC_001258
TCONS_00002045 mRNA downstream 57629 26253192 ~ 26292897 (-) False XLOC_001258
TCONS_00002046 mRNA downstream 57629 26289358 ~ 26292897 (-) False XLOC_001258
TCONS_00002040 mRNA downstream 219438 26127818 ~ 26131088 (-) False XLOC_001255
TCONS_00002050 mRNA upstream 39683 26390324 ~ 26398361 (-) False XLOC_001260
TCONS_00002055 mRNA upstream 87957 26438598 ~ 26444075 (-) True XLOC_001261
TCONS_00002056 mRNA upstream 187805 26538446 ~ 26544268 (-) False XLOC_001262
TCONS_00002059 mRNA upstream 309728 26660369 ~ 26664840 (-) False XLOC_001265
TCONS_00002062 mRNA upstream 320187 26670828 ~ 26676391 (-) False XLOC_001267
TCONS_00002044 other downstream 55823 26252908 ~ 26294703 (-) False XLOC_001258
TCONS_00002042 other downstream 164932 26183739 ~ 26185594 (-) True XLOC_001256
TCONS_00002039 other downstream 287367 26051481 ~ 26063159 (-) True XLOC_001254
TCONS_00002024 other downstream 413885 25918274 ~ 25936641 (-) True XLOC_001249
TCONS_00002016 other downstream 638723 25709813 ~ 25711803 (-) True XLOC_001245
TCONS_00002049 other upstream 38512 26389153 ~ 26394460 (-) False XLOC_001260
TCONS_00002051 other upstream 41114 26391755 ~ 26398274 (-) False XLOC_001260
TCONS_00002052 other upstream 43724 26394365 ~ 26398303 (-) False XLOC_001260
TCONS_00002054 other upstream 87956 26438597 ~ 26439350 (-) False XLOC_001261
TCONS_00002057 other upstream 188320 26538961 ~ 26539624 (-) True XLOC_001262

Expression Profile

//