Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00046957 |
| length | 1325 |
| lncRNA type | sense_over |
| GC content | 0.56 |
| exon number | 8 |
| gene id | XLOC_022869 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 17140938 ~ 17216312 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0060070 | canonical Wnt signaling pathway | biological_process |
| GO:0060729 | intestinal epithelial structure maintenance | biological_process |
| GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
| GO:0019725 | cellular homeostasis | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0031491 | nucleosome binding | molecular_function |
| GO:0042393 | histone binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00046954 | lncRNA | upstream | 298262 | 16719606 ~ 16901861 (+) | False | XLOC_022863 |
| TCONS_00046953 | lncRNA | upstream | 298262 | 16719606 ~ 16901861 (+) | False | XLOC_022863 |
| TCONS_00045445 | lncRNA | upstream | 299911 | 16726748 ~ 16900212 (+) | True | XLOC_022863 |
| TCONS_00045438 | lncRNA | upstream | 991123 | 16207562 ~ 16209000 (+) | False | XLOC_022861 |
| TCONS_00045439 | lncRNA | upstream | 991516 | 16207563 ~ 16208607 (+) | True | XLOC_022861 |
| TCONS_00045472 | lncRNA | downstream | 43068 | 17256843 ~ 17259487 (+) | False | XLOC_022870 |
| TCONS_00045473 | lncRNA | downstream | 44025 | 17257800 ~ 17258655 (+) | True | XLOC_022870 |
| TCONS_00046803 | lncRNA | downstream | 67065 | 17280840 ~ 17282535 (+) | True | XLOC_022873 |
| TCONS_00045479 | lncRNA | downstream | 104746 | 17318521 ~ 17319849 (+) | True | XLOC_022874 |
| TCONS_00046959 | lncRNA | downstream | 108711 | 17322486 ~ 17325645 (+) | False | XLOC_022875 |
| TCONS_00045462 | mRNA | upstream | 19286 | 17145830 ~ 17180837 (+) | False | XLOC_022869 |
| TCONS_00045461 | mRNA | upstream | 19286 | 17145830 ~ 17180837 (+) | False | XLOC_022869 |
| TCONS_00045455 | mRNA | upstream | 72290 | 17068724 ~ 17127833 (+) | False | XLOC_022868 |
| TCONS_00045456 | mRNA | upstream | 73126 | 17069420 ~ 17126997 (+) | True | XLOC_022868 |
| TCONS_00045454 | mRNA | upstream | 176446 | 17007407 ~ 17023677 (+) | True | XLOC_022867 |
| TCONS_00045471 | mRNA | downstream | 43018 | 17256793 ~ 17259643 (+) | False | XLOC_022870 |
| TCONS_00045474 | mRNA | downstream | 46226 | 17260001 ~ 17267235 (+) | False | XLOC_022871 |
| TCONS_00045475 | mRNA | downstream | 46554 | 17260329 ~ 17267235 (+) | False | XLOC_022871 |
| TCONS_00045476 | mRNA | downstream | 49104 | 17262879 ~ 17263667 (+) | True | XLOC_022871 |
| TCONS_00045477 | mRNA | downstream | 56074 | 17269849 ~ 17276770 (+) | False | XLOC_022872 |
| TCONS_00045453 | other | upstream | 189041 | 17005678 ~ 17011082 (+) | False | XLOC_022867 |
| TCONS_00045449 | other | upstream | 214584 | 16983303 ~ 16985539 (+) | False | XLOC_022866 |
| TCONS_00045446 | other | upstream | 392475 | 16807521 ~ 16807648 (+) | True | XLOC_022864 |
| TCONS_00045443 | other | upstream | 649574 | 16393527 ~ 16550549 (+) | False | XLOC_022862 |
| TCONS_00045423 | other | upstream | 1787018 | 15412989 ~ 15413105 (+) | True | XLOC_022853 |
| TCONS_00045481 | other | downstream | 108869 | 17322644 ~ 17325645 (+) | False | XLOC_022875 |
| TCONS_00045482 | other | downstream | 120903 | 17334678 ~ 17337526 (+) | False | XLOC_022877 |
| TCONS_00045484 | other | downstream | 121743 | 17335518 ~ 17337959 (+) | True | XLOC_022877 |
| TCONS_00045488 | other | downstream | 524744 | 17738519 ~ 17738635 (+) | True | XLOC_022879 |
| TCONS_00045489 | other | downstream | 863768 | 18077543 ~ 18077659 (+) | True | XLOC_022880 |
