Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1883917 |
| length | 679 |
| lncRNA type | read_through |
| GC content | 0.47 |
| exon number | 4 |
| gene id | G1646573 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 62342250 ~ 62397989 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1883912 | lncRNA | upstream | 6242 | 62335733 ~ 62336008 (+) | True | G1646569 |
| TU1883899 | lncRNA | upstream | 32526 | 62309441 ~ 62309724 (+) | True | G1646560 |
| TU1883897 | lncRNA | upstream | 37076 | 62304931 ~ 62305174 (+) | True | G1646558 |
| TU1883889 | lncRNA | upstream | 49404 | 62292543 ~ 62292846 (+) | True | G1646552 |
| TU1883888 | lncRNA | upstream | 49743 | 62292292 ~ 62292507 (+) | True | G1646551 |
| TU1883775 | lncRNA | downstream | 16379 | 62414368 ~ 62446035 (+) | True | lgals3a |
| TU1883952 | lncRNA | downstream | 50819 | 62448808 ~ 62449040 (+) | True | G1646607 |
| TU1884004 | lncRNA | downstream | 145155 | 62543144 ~ 62543659 (+) | True | G1646642 |
| TU1884011 | lncRNA | downstream | 162217 | 62560206 ~ 62560803 (+) | True | G1646649 |
| TU1884013 | lncRNA | downstream | 163777 | 62561766 ~ 62562776 (+) | True | G1646650 |
| XM_036955320.1 | mRNA | upstream | 68886 | 62248727 ~ 62273364 (+) | True | l2hgdh |
| XM_036955321.1 | mRNA | upstream | 97969 | 62217103 ~ 62244281 (+) | False | cdkl1 |
| XM_036955322.1 | mRNA | upstream | 97971 | 62217121 ~ 62244279 (+) | True | cdkl1 |
| XM_036955318.1 | mRNA | upstream | 131797 | 62095441 ~ 62210453 (+) | False | map4k5 |
| XM_021574895.2 | mRNA | downstream | 21367 | 62419356 ~ 62422349 (+) | True | cdkn3 |
| XM_036955331.1 | mRNA | downstream | 45154 | 62443143 ~ 62445944 (+) | False | lgals3a |
| XM_036955330.1 | mRNA | downstream | 45155 | 62443144 ~ 62445944 (+) | False | lgals3a |
| XM_036955332.1 | mRNA | downstream | 57128 | 62455117 ~ 62460307 (+) | True | LOC118941522 |
| XM_036955334.1 | mRNA | downstream | 68265 | 62466254 ~ 62485447 (+) | True | LOC110504280 |
| TU1883836 | other | upstream | 196960 | 62144183 ~ 62145290 (+) | True | G1646509 |
| TU1883513 | other | upstream | 781166 | 61558041 ~ 61561084 (+) | True | G1646294 |
| TU1883395 | other | upstream | 997096 | 61344787 ~ 61345154 (+) | True | G1646225 |
| TU1883202 | other | upstream | 1050409 | 61279819 ~ 61291841 (+) | False | LOC110498404 |
| TU1883226 | other | upstream | 1138898 | 61202358 ~ 61203352 (+) | True | G1646089 |
| TU1883744 | other | downstream | 89012 | 62487001 ~ 62493719 (+) | True | srsf5a |
| TU1884898 | other | downstream | 618966 | 63016955 ~ 63018688 (+) | True | G1647342 |
| TU1884975 | other | downstream | 677160 | 63075149 ~ 63077143 (+) | True | G1647411 |
| TU1885075 | other | downstream | 804767 | 63202756 ~ 63204057 (+) | False | G1647477 |
| TU1885128 | other | downstream | 993636 | 63391625 ~ 63391832 (+) | False | LOC110498409 |
