RNA id: XM_039779149.1


Basic Information

Item Value
RNA id XM_039779149.1
length 4744
RNA type mRNA
GC content 0.52
exon number 28
gene id slc4a5b
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 30587007 ~ 30683074 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CAGTCCCCATTACTCAGATTGTCTCTACAGTCGCTGAGGGCAGTTTGTCGCTGTTTCGctccacagagacacaacattgTTCAGATCTGTACTGTTCTcagttttttgtgcttttttagGGTACTTTACTTTGACATTATAAAAATACTCCGGTAACTTCTCGATTTGGGTTTTTCTCAGCTTCATCTTCCACGTCAGGATGGATCATCAGGACTGGCAGCGGGGGAGAAGTAGAGGGCACCGGCGCAGCAACAACAACGACGACGATGACGaggcCCAGCCAGTCTACATCGGCGTTCCAGTTTCCCACAGACGGAAAAGGCGCAGGCATCGCTCCAACGCCAGTGACCCTGACCGCGACGCGCGTCACTCCCACTATGATCACCACACGCACGCCGAGCACTCGCAGCGCGGCTATTACCACGACGACAGAGAGGAGCACTACGACGATGACGATGGCAGTGCAGAGCACCACCAGCACGCCAACCTCTCAGTGTCCCCTGCAGCAGAGCGGCTGCGCCACATCCTGGGGGAGGATGACAACACCCCGACGCCCACGATATTCACCGAGATGGACACGCTGCAGAACGAGGGCGGCGAAATCGAGTGGAAAGAGTCtgccagGTGGGTGAAGTTTGAGGAGAAGGTGGAGGAGGgcggagagagatggagcaagCCCCATGTGTCCACGCTGACCCTCCACAGCCTGTTTGAGCTGCGGACCTGTCTGCAGACAGGAAGCATCCTGCTCGACCTGGAGGGCTACTCACTGCCTCAGATCGTGGATGAGATCGTGGATCGGCAGATAGCCGATGGTCTCATTCCTCCGGATCTGAAGGAGAAGATCAGCTTCGTGTTGCTCCGGAAGCACCGCCACCAGACCAAGAAACCGATCCACCGCTCGCTGGCCGACATCGGGAAGTCCTCCGGCGCTGCACCCAACCGCAGTCCTCAGGTTAATCTGAAATCTAGCACTAATTCAGCTTCTGGGATCCACCGCTCCACAGAAGACCTACACACTCGGCAGTCGAGCAGCCTTAGCCGCCTGCATCAAGCCCAGAGCCGAAGCATGAATGATATTTCGGACACGCCAAGCACAGACCAGCTGAAGAATAAGTTCATGAAGAAAATTCCTCGTGACGCCGAAGCTTCCAACGTCCTGGTCGGCGAGGTGGATTTTCTGGACAAACCCTTCGTCTCGTTTGTACGTTTGGCTCAGGCCACCACTCTGGGAGGCCTCACCGAAGTCCCCGTGCCCACAAGGTTTCTCTTCATCTTGCTGGGTCCTTATGGCAAAACCAAGTCCTACAATGAGATCGGCAGAGCTATCGCTACGCTCATGGTGGACGATCTGTTTAGTGATGTGGCCTACAAAGCCCGGGACCGTGAAGACCTGATCGCGGGTGTGGATGAGTTTCTGGACGAGGTGATAGTCCTCCCTCCAGGAGAATGGGACCCAAAAATACGCATCGAACCTCCCAAGAAGGTCCCATCGGCAGAAATGAGGAAGTCAGTGCTGAACCTCAACGAGCTGGGTCAAATGAACGGCTCGGCCGGCGGCGCAGCCGGAGGAGAGGACACGGAGTTACCAGCTCCACATGAGCTCGGAGAGGAGCTGAAGTTCACCGGGAGGTTTGCAGGCGGATTATGGCTGGACATCAAGCGGAAGGCCCCGTGGATTTGTAGTGACATCTATGACGGCTTCCACATCCAGTCCATCTCCGCCGTGGTCTTCATCTACCTGGGCTGCATCACCAATGCCATCACCTTCGGGGGACTGCTAGGGGACGCTACCGACAACTACCAGGGAGTGATGGAGAGTTTCCTCGGCACTGCTTTGGCGGGGACTGTGTTTTGTGCTTTCAGCGGTCAACCTCTCATCATCCTCAGTTCAACTGGACCCATTCTCATCTTTGAGAAACTGCTTTATGAATTCAGCAAGAGCAACGGTATCGACTACATGGAGTTGCGTCTGTGGATCGGCATTCATTCGTGTCTCCAGTGTTTCCTGCTGGTAGTCACGGACGCCAGCTACATTATCAAGTACATGACGCGCTTCACAGAGGAGGGGTTCTCCAGCCTCATCTCCTTCATATTCATCTCTGATGCCATCAAGAAGATGGTAGGAGCCTTGAAATATTACCCAATCAACCGCGGCTTCAAGCCTGACTACATAACTTCCTACAAGTGTGAATGCATCGCGCCGGACCAGGCATCTGTGCTCGGCTTCAATGTTTCAGCTCCACTCGCAGATGATAACATGACTCTGCTGTTTAACTTGACAGACATGGACTGGAGTCAGCTGAGTAAGAAAGAGTGCGTGAATTACGGCGGCACGCTAGTGGGGAACTCCTGTAAGTATGTGCCCGACTTGGCCCTCATGTCCTTCATCCTCTTTTTCGGCACCTACTCCATGACCGTGTCTCTCAAGAAGTTCAAGTTCAGCCGCTACTTCCCGACAACGCTCCGTTCCCTCATCAGCGATTTCTCCGTCATCATTTCCATCCTGGTCTTCTGTGGGGTGGATCGCCTGATGGAGCTGGACACCCCCAAACTGCACGTGCCCACTGAGATCAAGCCCACACGTCCGGATCGCGGCTGGCTGGTGATGCCGTTTGGTAAGAACCCGTGGTGGTGGTATGTGGCCAGCTTCGTTCCCGCTCTCCTGGTCACCATCTTAATCTTCATGGACCAGCAGATCAGCGCCGTCATCGTCAACCGCAAAGAGAACAAACTGAAGAAAGGTTGTGGCTACCACTTGGACCTGTTCTGGGTGGGGGTGCTGATGGCCGCGTGTTCCTTCATGGGTCTGCCCTGGTACGTAGCAGCTACCGTCATCTCCATCGCACACATCGACTCTCTGAAGATGGAGAGCGAGTCCAGCGCGCCTGGAGAGCAGCCACAGTTCCTCGGAGTCAGGGAGCAGAGGTTGACGGGCATTATGGTGTTTGTTCTGACTGGTCTCTCAGTTTTCCTTGCTCCAGTTCTTCAGTACATCCCCATGCCAGTCCTGTATGGAGTGTTCCTCTACATGGGAGTGGCCTCACTGAGTGGCATACAGTTCTGGGAGCGTATCAAGCTGTATCTGATGCCGCCCAAACACCAGCCAGACTTCTCCTTCCTGCGTCACGTTCCTCTGAGACGCGTCCATCTTTTCACGCTCGTCCAGATCATCTGTTTGGCCGTCCTCTGGATCCTGAAGTCCACCTTCCTGGCCATCATCTTCCCAGTGATGATTCTGGGTCTGATGGTCGTGAGGAAGCTGCTGGATCTGATATTCTCACAACACGACTTGGCCTGGCTGGACGACATCCTGCCAGACAAagacaagaagaaaaaggaggACGACAAGACCAAGAAGAGGGATAAAAAGGCGGCCGAGCCAGACAGCGACGATGAGCCCAACAGCTCTGTCGTCCCCCCTCCAGTGAAGATTCCCATGGAGGCCATAGAGTCCCACCCTGAGCCTGTCCCCGTCCATGTTAACCCTCCCTCCCAAAACCAAACCTCTGATTGAGATGAACCCTTACTCGACAGTCTCGTCCAATCAAAATGAATTAGACCGCAGCATCACCCTACACCTGAAGATCTCCTGCCCTGACTCACCTGCCCACTCCCAGACCTCGAGCCTCGGCCCCGGGGACGCTCCGCCACGCCCGCCGTCACAGCCCCCGCCGCCGCGCCCGCCCGCGCCCCAGCTCAGCATCCAGGTGGACTCGGACTGCGGCGAGTCTGGCTTCTACTCCAGGCAACACCACCGCTTTTATCCCCCTCAGGTCTGGCTGCCTCCACCTGAAATACACAGAGACTTTCGCCAAAAACTGCACGCTCACTTCGGGGACTCCTGTGCTGAGACCGTCCTGTAGACAcactgtttacacacacacacacacacagacgtttGTTTCACTATCTCTGTGGGGACCtgccattgacataatgcattccctagccccttaccctaaccttaaccatcacaacgcGGATGGTCCCAcgcaacgctcttcacaagtaaaataaatgatccgtTCACTACTATTATTGAATTTGTgcgtttttatttaattttatagtatttgaagaactttttttttttttaaagaatgtggaaaaaaatgacaaaaatgttcataatgtggggggaaaaatcaacaaaaaaagcgacacaattttgacccagaaaaaacgTGCATGGTggaacgggaagacaacacaagggttaaataacaAACATTAAATAAGAAATTAATTAGATTTTTCGcatcaaaataacaaaatagaaCAAAAATCTCTTCAAATAAATTAACTGAGACGCAACAAGTGAAATGTAAAGGAGATTACGCGCCAGGACGTTTTAAAAACTCTGTCGtgattcttttttattattattattattatctcctCCGGTTGtaacttttatatatttattcacgatgcatcgttacatcccgAATTATCCCCCGACCTCaaactctctctcctctcctctctcaggGCACAGCTCCTCCAGTGACAAGAATAGCTTCAAAGAAACAACCAaaatgtgttaataacaatataaataataataatatatgcatGAACCCGCTCTGAACCTGTGTTAGGCATCAGTATTATTGATCATTTGTtcatctttgctttttttctctcgagCATTTAAAGAATAATAGAGATTTACATGATTGTTTATGTGCATTATGGATGTAAAACcctgaaaatgtaataaaacggCATATAAAGTTGG

Function

GO: NA

KEGG:

id description
K13857 SLC4A5, NBC4; solute carrier family 4 (sodium bicarbonate cotransporter), member 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005636600.1 lncRNA upstream 9801 30576309 ~ 30577206 (+) True LOC120544906
TU242247 lncRNA upstream 156357 30423953 ~ 30430650 (+) True G178950
TU242231 lncRNA upstream 211842 30374814 ~ 30375165 (+) True G178934
TU242230 lncRNA upstream 218098 30364760 ~ 30368909 (+) True G178933
TU242227 lncRNA upstream 255393 30324112 ~ 30331614 (+) False LOC120545414
TU242323 lncRNA downstream 1125 30684199 ~ 30684478 (+) True G178983
TU242324 lncRNA downstream 1802 30684876 ~ 30688108 (+) True G178984
TU242329 lncRNA downstream 1802 30684876 ~ 30688108 (+) False G178984
TU242350 lncRNA downstream 102224 30785298 ~ 30785695 (+) True G178996
TU242671 lncRNA downstream 184944 30868018 ~ 30869258 (+) True G179236
XM_039779064.1 mRNA upstream 44474 30511961 ~ 30542533 (+) True scarb1
XM_039779704.1 mRNA upstream 120795 30450437 ~ 30466212 (+) True ash2l
XM_039779705.1 mRNA upstream 120795 30450437 ~ 30466212 (+) False ash2l
XM_039779707.1 mRNA upstream 187898 30381981 ~ 30399109 (+) True ddx56
XM_039779732.1 mRNA upstream 242204 30338710 ~ 30344803 (+) True LOC120545426
XM_039780197.1 mRNA downstream 432778 31115852 ~ 31123205 (+) True crybb1
XM_039780195.1 mRNA downstream 443385 31126459 ~ 31152167 (+) True acads
XM_039780640.1 mRNA downstream 519477 31202551 ~ 31240037 (+) False sept5b
XM_039780641.1 mRNA downstream 520205 31203279 ~ 31240037 (+) True sept5b
XM_039780642.1 mRNA downstream 520675 31203749 ~ 31240038 (+) False sept5b
XR_005636691.1 other upstream 276113 30264383 ~ 30310894 (+) True zmiz2
TU242148 other upstream 564790 30021319 ~ 30022217 (+) True G178881
TU242149 other upstream 564790 30021319 ~ 30022217 (+) False G178881
TU242091 other upstream 791693 29794144 ~ 29795314 (+) False LOC120545429
TU242100 other upstream 842932 29742623 ~ 29744075 (+) True G178845
TU242927 other downstream 704673 31387747 ~ 31480094 (+) True G179407
TU243294 other downstream 1396103 32079177 ~ 32099542 (+) True G179655
TU243292 other downstream 1406354 32089428 ~ 32092131 (+) False G179655
TU243298 other downstream 1406354 32089428 ~ 32099542 (+) False G179655
TU243411 other downstream 1758981 32442055 ~ 32448815 (+) True LOC120545732

Expression Profile