Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU90977 |
| length | 827 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 3 |
| gene id | LOC120560010 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 39862463 ~ 39878496 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90967 | lncRNA | upstream | 31135 | 39794220 ~ 39846179 (+) | True | G68094 |
| TU90957 | lncRNA | upstream | 158618 | 39718070 ~ 39718696 (+) | True | G68085 |
| TU90956 | lncRNA | upstream | 173872 | 39703094 ~ 39703442 (+) | True | G68084 |
| XR_005639480.1 | lncRNA | upstream | 274393 | 39596153 ~ 39602921 (+) | True | LOC120560408 |
| TU90986 | lncRNA | downstream | 4573 | 39883069 ~ 39883613 (+) | True | G68106 |
| TU90987 | lncRNA | downstream | 5280 | 39883776 ~ 39886482 (+) | True | G68107 |
| TU91022 | lncRNA | downstream | 144276 | 40022772 ~ 40041890 (+) | True | G68141 |
| TU91026 | lncRNA | downstream | 154577 | 40033073 ~ 40035391 (+) | True | G68144 |
| TU91052 | lncRNA | downstream | 264791 | 40143287 ~ 40143520 (+) | True | G68163 |
| XM_039802871.1 | mRNA | upstream | 21577 | 39843146 ~ 39855737 (+) | True | LOC120560406 |
| XM_039804598.1 | mRNA | upstream | 1039739 | 38832087 ~ 38837575 (+) | True | LOC120561457 |
| XM_039802713.1 | mRNA | upstream | 1049529 | 38816729 ~ 38827785 (+) | True | tgoln2 |
| XM_039802712.1 | mRNA | upstream | 1049912 | 38816729 ~ 38827402 (+) | False | tgoln2 |
| XM_039802710.1 | mRNA | upstream | 1075598 | 38712285 ~ 38801716 (+) | False | tcf7l1b |
| XM_039804519.1 | mRNA | downstream | 255270 | 40133766 ~ 40164425 (+) | True | vps33a |
| XM_039804552.1 | mRNA | downstream | 315172 | 40193668 ~ 40205536 (+) | True | adra1aa |
| XM_039802032.1 | mRNA | downstream | 500899 | 40379395 ~ 40398123 (+) | True | tmem230b |
| XM_039804050.1 | mRNA | downstream | 522119 | 40400615 ~ 40506486 (+) | True | igsf9b |
| XM_039804393.1 | mRNA | downstream | 655552 | 40534048 ~ 40556066 (+) | True | zfand5a |
| TU90882 | other | upstream | 463333 | 39410238 ~ 39413981 (+) | True | G68023 |
| TU90883 | other | upstream | 463333 | 39410238 ~ 39413981 (+) | False | G68023 |
| TU90637 | other | upstream | 1278841 | 38595811 ~ 38598473 (+) | False | G67824 |
| unassigned_transcript_271 | other | upstream | 1445650 | 38431592 ~ 38431664 (+) | True | trnaf-gaa_6 |
| TU90566 | other | upstream | 1469791 | 38361472 ~ 38407523 (+) | False | nkx6.3 |
| TU91051 | other | downstream | 255296 | 40133792 ~ 40142482 (+) | False | vps33a |
| TU91053 | other | downstream | 266263 | 40144759 ~ 40150677 (+) | False | vps33a |
| TU91064 | other | downstream | 354977 | 40233473 ~ 40234591 (+) | True | G68173 |
| TU91093 | other | downstream | 500921 | 40379417 ~ 40382450 (+) | False | tmem230b |
| TU91208 | other | downstream | 988751 | 40867247 ~ 40897108 (+) | True | G68285 |
