RNA id: TU91124



Basic Information


Item Value
RNA id TU91124
length 221
lncRNA type intronic
GC content 0.48
exon number 2
gene id G68217
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 40463203 ~ 40465625 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtctgtctgtctgtctgtctgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgggtgtgtctctgtgtgtgtctctgtgtgtatgtttgtgtgtgtatgtgtgggtgggtgcttgtgtgtctctgtgtctgtgtgtgtatgtgtatgtgtgtgtatgtatgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91118 lncRNA upstream 7156 40455211 ~ 40456047 (+) False G68211
TU91117 lncRNA upstream 7684 40447645 ~ 40455519 (+) True G68211
TU91121 lncRNA upstream 8202 40454644 ~ 40455001 (+) True G68214
TU91110 lncRNA upstream 36570 40426157 ~ 40426633 (+) True G68205
TU91106 lncRNA upstream 55474 40406323 ~ 40407729 (+) True G68202
TU91129 lncRNA downstream 18052 40483677 ~ 40484113 (+) True G68222
TU91033 lncRNA downstream 91894 40557519 ~ 40558922 (+) True G68148
TU91034 lncRNA downstream 91894 40557519 ~ 40558922 (+) False G68148
TU91035 lncRNA downstream 91894 40557519 ~ 40558922 (+) False G68148
TU91036 lncRNA downstream 91894 40557519 ~ 40957793 (+) False G68148
XM_039802032.1 mRNA upstream 65080 40379395 ~ 40398123 (+) True tmem230b
XM_039804552.1 mRNA upstream 257667 40193668 ~ 40205536 (+) True adra1aa
XM_039804519.1 mRNA upstream 298778 40133766 ~ 40164425 (+) True vps33a
XM_039802099.1 mRNA upstream 585708 39862463 ~ 39877495 (+) True LOC120560010
XM_039802871.1 mRNA upstream 607466 39843146 ~ 39855737 (+) True LOC120560406
XM_039804393.1 mRNA downstream 68423 40534048 ~ 40556066 (+) True zfand5a
XM_039804394.1 mRNA downstream 68423 40534048 ~ 40556066 (+) False zfand5a
XM_039804395.1 mRNA downstream 100445 40566070 ~ 40642169 (+) True snrnp200
XM_039803455.1 mRNA downstream 201700 40667325 ~ 40678275 (+) True tmem127
XM_039803456.1 mRNA downstream 218614 40684239 ~ 40693059 (+) True es1
TU91093 other upstream 80753 40379417 ~ 40382450 (+) False tmem230b
TU91064 other upstream 228612 40233473 ~ 40234591 (+) True G68173
TU91053 other upstream 312526 40144759 ~ 40150677 (+) False vps33a
TU91051 other upstream 320721 40133792 ~ 40142482 (+) False vps33a
TU90883 other upstream 1049222 39410238 ~ 39413981 (+) False G68023
TU91208 other downstream 401622 40867247 ~ 40897108 (+) True G68285
TU91230 other downstream 478908 40944533 ~ 40949978 (+) False trpm6
TU91231 other downstream 483895 40949520 ~ 40949978 (+) False trpm6
TU91239 other downstream 559374 41024999 ~ 41038738 (+) True G68309
TU91293 other downstream 727633 41193258 ~ 41207379 (+) False anxa1a

Expression Profile