RNA id: TU91225


Basic Information

Item Value
RNA id TU91225
length 239
lncRNA type sense_over
GC content 0.46
exon number 2
gene id G68302
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 40907874 ~ 40946162 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtatctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtatctgtctgtgtgtgcgtgtatctgtgtgtatctgtgtgtatgtgtgtgtgtgtatgtgtatatgtgtatgtgtatctgtctgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91224 lncRNA upstream 1488 40905721 ~ 40906386 (+) True G68301
TU91200 lncRNA upstream 4789 40871531 ~ 40903085 (+) True G68277
TU91206 lncRNA upstream 14721 40888333 ~ 40893153 (+) True G68283
TU91209 lncRNA upstream 15221 40892332 ~ 40892653 (+) True G68286
XR_005639434.1 lncRNA upstream 19997 40887224 ~ 40887877 (+) False LOC120560183
TU91204 lncRNA downstream 4036 40950198 ~ 40950589 (+) True G68281
TU91238 lncRNA downstream 37662 40983824 ~ 41070649 (+) False G68309
TU91242 lncRNA downstream 38974 40985136 ~ 41036618 (+) False G68309
TU91258 lncRNA downstream 89952 41036114 ~ 41043825 (+) True G68323
TU91259 lncRNA downstream 93420 41039582 ~ 41043179 (+) True G68324
XM_039802427.1 mRNA upstream 24315 40878899 ~ 40883559 (+) True wu:fa19b12
XM_039802426.1 mRNA upstream 37899 40849730 ~ 40869975 (+) True carnmt1
XM_039802425.1 mRNA upstream 73329 40820609 ~ 40834545 (+) False LOC120560177
XM_039802424.1 mRNA upstream 80069 40820611 ~ 40827805 (+) True LOC120560177
XM_039802125.1 mRNA upstream 129829 40737947 ~ 40778045 (+) False tmc2b
XM_039802430.1 mRNA downstream 70491 41016653 ~ 41070906 (+) False rorb
XM_039802429.1 mRNA downstream 108589 41054751 ~ 41070906 (+) True rorb
XM_039804052.1 mRNA downstream 135445 41081607 ~ 41097796 (+) True LOC120561096
XM_039802431.1 mRNA downstream 247061 41193223 ~ 41214870 (+) False anxa1a
XM_039802432.1 mRNA downstream 276540 41222702 ~ 41254622 (+) True LOC120560189
TU91208 other upstream 10766 40867247 ~ 40897108 (+) True G68285
TU91093 other upstream 525424 40379417 ~ 40382450 (+) False tmem230b
TU91064 other upstream 673283 40233473 ~ 40234591 (+) True G68173
TU91053 other upstream 757197 40144759 ~ 40150677 (+) False vps33a
TU91051 other upstream 765392 40133792 ~ 40142482 (+) False vps33a
TU91231 other downstream 3358 40949520 ~ 40949978 (+) False trpm6
TU91239 other downstream 78837 41024999 ~ 41038738 (+) True G68309
TU91293 other downstream 247096 41193258 ~ 41207379 (+) False anxa1a
TU91271 other downstream 261622 41207784 ~ 41262350 (+) True anxa1a
TU91275 other downstream 261622 41207784 ~ 41262350 (+) False anxa1a

Expression Profile