RNA id: TU91258


Basic Information

Item Value
RNA id TU91258
length 242
lncRNA type intronic
GC content 0.40
exon number 2
gene id G68323
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41036114 ~ 41043825 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacatatacacacacacacacacacacacacacacacacacatatatatatatatacacacacacacacacacagagtgtatCTGAGCACGAGCTCCACAGTTGTTCTGATTTAACTAGAGGTAGTATATCACTAGTTAACTAGTAGGGAGCTACGCTGTGTATATTTAACTAGAGGTAGAAGATCACTAGTTAACTGGTAGGGAGCTACGCTGTGCATATTTAACTAGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91036 lncRNA upstream 78321 40557519 ~ 40957793 (+) False G68148
TU91204 lncRNA upstream 85525 40950198 ~ 40950589 (+) True G68281
TU91225 lncRNA upstream 89952 40907874 ~ 40946162 (+) True G68302
TU91207 lncRNA upstream 106765 40928462 ~ 40929349 (+) True G68284
TU91192 lncRNA upstream 118195 40886649 ~ 40917919 (+) True LOC120560183
TU91237 lncRNA downstream 18014 41061839 ~ 41070649 (+) False G68309
TU91268 lncRNA downstream 51033 41094858 ~ 41095218 (+) False LOC120561096
TU91269 lncRNA downstream 88358 41132183 ~ 41132543 (+) False G68332
TU91270 lncRNA downstream 88358 41132183 ~ 41141445 (+) True G68332
TU91284 lncRNA downstream 91952 41135777 ~ 41270849 (+) False anxa1a
XM_039802428.1 mRNA upstream 89305 40891729 ~ 40946809 (+) True trpm6
XM_039802427.1 mRNA upstream 152555 40878899 ~ 40883559 (+) True wu:fa19b12
XM_039802426.1 mRNA upstream 166139 40849730 ~ 40869975 (+) True carnmt1
XM_039802425.1 mRNA upstream 201569 40820609 ~ 40834545 (+) False LOC120560177
XM_039802429.1 mRNA downstream 10926 41054751 ~ 41070906 (+) True rorb
XM_039804052.1 mRNA downstream 37782 41081607 ~ 41097796 (+) True LOC120561096
XM_039802431.1 mRNA downstream 149398 41193223 ~ 41214870 (+) False anxa1a
XM_039802432.1 mRNA downstream 178877 41222702 ~ 41254622 (+) True LOC120560189
XM_039804053.1 mRNA downstream 222822 41266647 ~ 41267519 (+) True LOC120561097
TU91230 other upstream 86136 40944533 ~ 40949978 (+) False trpm6
TU91231 other upstream 86136 40949520 ~ 40949978 (+) False trpm6
TU91208 other upstream 139006 40867247 ~ 40897108 (+) True G68285
TU91093 other upstream 653664 40379417 ~ 40382450 (+) False tmem230b
TU91064 other upstream 801523 40233473 ~ 40234591 (+) True G68173
TU91293 other downstream 149433 41193258 ~ 41207379 (+) False anxa1a
TU91271 other downstream 163959 41207784 ~ 41262350 (+) True anxa1a
TU91275 other downstream 163959 41207784 ~ 41262350 (+) False anxa1a
TU91276 other downstream 163959 41207784 ~ 41262350 (+) False anxa1a
TU91277 other downstream 163959 41207784 ~ 41262350 (+) False anxa1a

Expression Profile