Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00002847 |
| length | 1405 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 4 |
| gene id | XLOC_000370 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 31354585 ~ 31359319 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0019222 | regulation of metabolic process | biological_process |
| GO:0080090 | regulation of primary metabolic process | biological_process |
| GO:0051171 | regulation of nitrogen compound metabolic process | biological_process |
| GO:0031323 | regulation of cellular metabolic process | biological_process |
| GO:0071696 | ectodermal placode development | biological_process |
| GO:0071697 | ectodermal placode morphogenesis | biological_process |
| GO:0060255 | regulation of macromolecule metabolic process | biological_process |
| GO:0060788 | ectodermal placode formation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003082 | lncRNA | upstream | 210058 | 31141119 ~ 31144527 (+) | False | XLOC_000369 |
| TCONS_00000636 | lncRNA | upstream | 210058 | 31141317 ~ 31144527 (+) | True | XLOC_000369 |
| TCONS_00000630 | lncRNA | upstream | 299403 | 31054415 ~ 31055182 (+) | False | XLOC_000367 |
| TCONS_00002845 | lncRNA | upstream | 495061 | 30855390 ~ 30859524 (+) | True | XLOC_000365 |
| TCONS_00000626 | lncRNA | upstream | 496660 | 30853969 ~ 30857925 (+) | False | XLOC_000365 |
| TCONS_00000637 | lncRNA | downstream | 159920 | 31519239 ~ 31520972 (+) | True | XLOC_000371 |
| TCONS_00003083 | lncRNA | downstream | 650943 | 32010262 ~ 32011794 (+) | True | XLOC_000380 |
| TCONS_00002849 | lncRNA | downstream | 652561 | 32011880 ~ 32012378 (+) | True | XLOC_000381 |
| TCONS_00000651 | lncRNA | downstream | 658118 | 32017437 ~ 32018115 (+) | True | XLOC_000383 |
| TCONS_00002850 | lncRNA | downstream | 2158483 | 33517802 ~ 33518823 (+) | True | XLOC_000394 |
| TCONS_00000633 | mRNA | upstream | 224363 | 31110817 ~ 31130222 (+) | False | XLOC_000368 |
| TCONS_00000634 | mRNA | upstream | 224363 | 31112436 ~ 31130222 (+) | False | XLOC_000368 |
| TCONS_00000635 | mRNA | upstream | 224981 | 31113951 ~ 31129604 (+) | True | XLOC_000368 |
| TCONS_00000629 | mRNA | upstream | 289879 | 31019165 ~ 31064706 (+) | False | XLOC_000367 |
| TCONS_00000631 | mRNA | upstream | 290807 | 31054915 ~ 31063778 (+) | False | XLOC_000367 |
| TCONS_00000638 | mRNA | downstream | 213906 | 31573225 ~ 31598417 (+) | True | XLOC_000372 |
| TCONS_00000639 | mRNA | downstream | 278955 | 31638274 ~ 31643502 (+) | False | XLOC_000373 |
| TCONS_00000640 | mRNA | downstream | 283904 | 31643223 ~ 31669901 (+) | True | XLOC_000373 |
| TCONS_00000641 | mRNA | downstream | 298523 | 31657842 ~ 31672343 (+) | False | XLOC_000374 |
| TCONS_00000642 | mRNA | downstream | 298692 | 31658011 ~ 31672027 (+) | True | XLOC_000374 |
| TCONS_00000632 | other | upstream | 290735 | 31057240 ~ 31063850 (+) | True | XLOC_000367 |
| TCONS_00000628 | other | upstream | 389581 | 30955925 ~ 30965004 (+) | True | XLOC_000366 |
| TCONS_00000618 | other | upstream | 1127080 | 30227391 ~ 30227505 (+) | True | XLOC_000361 |
| TCONS_00000617 | other | upstream | 1188520 | 30165953 ~ 30166065 (+) | True | XLOC_000360 |
| TCONS_00000608 | other | upstream | 1494212 | 29831759 ~ 29860373 (+) | False | XLOC_000356 |
| TCONS_00000645 | other | downstream | 347350 | 31706669 ~ 31722875 (+) | True | XLOC_000376 |
| TCONS_00000653 | other | downstream | 692294 | 32051613 ~ 32065030 (+) | False | XLOC_000384 |
| TCONS_00000657 | other | downstream | 1154670 | 32513989 ~ 32514104 (+) | True | XLOC_000386 |
| TCONS_00000661 | other | downstream | 1346790 | 32706109 ~ 32706227 (+) | True | XLOC_000388 |
| TCONS_00000663 | other | downstream | 1855922 | 33215241 ~ 33216718 (+) | False | XLOC_000390 |
