RNA id: TCONS_00008257


Basic Information

Item Value
RNA id TCONS_00008257
length 1795
RNA type mRNA
GC content 0.47
exon number 3
gene id XLOC_004351
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 42101661 ~ 42106310 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATtagtaactgtttttttttttttttggtctactCTCCCGAGCTGAGTGATCTggtttctgattggtcagctctGTTGCTCTTCTGTTTCAGTGCTCTCTCTTTAATCCGTCAGTAGAGACTCGGAGCTCTTGGACTGCAGCCATGAGGAACCTGCTGACCACAAACGAGCAGAACTTCTACCGTGAGCTCATCCTGAAGGAGGCTTACACACGCCTGGCCTGGAAGGTGAAATACAGTAAGGAATACCCTAGCATTTTTACTTCTCGCAGACCCAAATCCATCGGGCTTTTTAATCCTCCACCTGTCGATAAACTAATTTTACCACCTGTTGTGGAACCGCGGGAAAAGCAGCGCGCGGCTCACGCGCAGATACAGGTGCGGCGGTCCCTCAGTGAGGCTCCTCTTATGAGACCCGTGAGCCCGCAGACCTCAGGGGCTCTTTATCAGGGAATCTCCACTGAGGGCAAAGGACGACTCCTGTATCTGAGGAAAAGGGCTCAAAAGGGGCCCGAGGAGAAGTTTGACTACCCCATACTCTCCTCCTGGGAGTATGGATGGAGACTAGGTGACTTTGAGACTGACTGCCGGACTCCAGCCAATGGGAGATCAGGGGTGGTAAAGAGTGCTTTCTACGCCAGGAATGGCAGACAGTTCTGCTCTCACGGTTCCCACTCAAATTCCCTGACTTATCTCTGATTTTCACTGGATAAAAAGCTGAATTACCATGACCAATACaccttatttttcattttaaggtaacCTATCATGCACCTTTTTACAAGATGGAAATTAGGTCTCTGATGTctttagagagtgtgtgtgaagtttcagtttaaattaccacactaataatgttttataactctctgaaactgaccctttaaggctttgatcctaactgtaccattttggtgactgtcgctttaaattcaaatgagattgtgctctttttagaagagggcggagctaaaatGGCAAATGCAAAACAGGGCTAACATTATCCTacacaggttcattctgaaaacgtagtcccgtggacgttgcTGGACACggcgaattatgtagccgaaggtacgtatggctgcatttcattttttaaacgaacgctatggggcgttatgacgccgttcctttaaGAGGATGCTtaccggctgactgcttacctccgtgtggactgCTTACCCGCCGCAAccggtttgtccagttagctcgtcagaatgtcggcggacttgagacgcagggaggagttgaccacgaccaCGACAatcgggttcgagtccggggaagagcggttccagaaatcagctaagacaaaaacagaatataaaaaaaaaatgaacaagttcgtaacagggtgagaatgtggtgaaatccgaaaatgtggtaaaaataagACAagcgcttttctttttttggacggcttttgtaaatcgctGGTTGGGTTAAGAGAAGTAGGTGGGTGGATGGGTCAATGGAttaaattggttgggtttagtgatggagggtgggtcagtcgattggccggtcgcccagttgGCCTTTCAGCCAGTCAGACAGATGATTCGGTCGAAAGCGGCCTCTGGTGCGTttgcgcgagaacagcgcgggtgcgaacTGCACTCGCAAGAGgaatttgagatgtgaaaaagctcACACAGCGGCCTTTtgcggattcacgaaaacaaaaactgctaaaataagGAACTCCCAGAATGtattttgcaatctccagaaacgtccacgggactacgttttcagaatgagcctgggttgacattaGCCctattcacaca

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000164635

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008867 lncRNA downstream 57380 42042562 ~ 42044281 (-) True XLOC_004349
TCONS_00008865 lncRNA downstream 75063 42004163 ~ 42026598 (-) True XLOC_004347
TCONS_00008866 lncRNA downstream 81796 42016754 ~ 42019865 (-) True XLOC_004348
TCONS_00008491 lncRNA downstream 102244 41975577 ~ 41999417 (-) True XLOC_004345
TCONS_00008864 lncRNA downstream 391604 41699575 ~ 41710057 (-) True XLOC_004340
TCONS_00008492 lncRNA upstream 6762 42113072 ~ 42125282 (-) True XLOC_004352
TCONS_00008493 lncRNA upstream 15545 42121855 ~ 42124252 (-) False XLOC_004353
TCONS_00008868 lncRNA upstream 16438 42122748 ~ 42124271 (-) True XLOC_004353
TCONS_00008494 lncRNA upstream 45134 42151444 ~ 42152573 (-) True XLOC_004356
TCONS_00008495 lncRNA upstream 628954 42735264 ~ 42735848 (-) True XLOC_004362
TCONS_00008256 mRNA downstream 2016 42062067 ~ 42099645 (-) True XLOC_004350
TCONS_00008255 mRNA downstream 104704 41994287 ~ 41996957 (-) True XLOC_004346
TCONS_00008254 mRNA downstream 134807 41966117 ~ 41966854 (-) True XLOC_004344
TCONS_00008253 mRNA downstream 247787 41846059 ~ 41853874 (-) True XLOC_004343
TCONS_00008252 mRNA downstream 315139 41782683 ~ 41786522 (-) True XLOC_004342
TCONS_00008258 mRNA upstream 22242 42128552 ~ 42134968 (-) True XLOC_004354
TCONS_00008259 mRNA upstream 44586 42150896 ~ 42230491 (-) True XLOC_004355
TCONS_00008260 mRNA upstream 198275 42304585 ~ 42418374 (-) False XLOC_004357
TCONS_00008261 mRNA upstream 201255 42307565 ~ 42315748 (-) False XLOC_004357
TCONS_00008262 mRNA upstream 201467 42307777 ~ 42417194 (-) False XLOC_004357
TCONS_00008250 other downstream 726535 41375011 ~ 41375126 (-) True XLOC_004339
TCONS_00008244 other downstream 1017298 41078191 ~ 41084363 (-) True XLOC_004334
TCONS_00008236 other downstream 1405525 40678213 ~ 40696136 (-) True XLOC_004327
TCONS_00008222 other downstream 1918865 40182681 ~ 40182796 (-) True XLOC_004319
TCONS_00008210 other downstream 3011670 39089875 ~ 39089991 (-) True XLOC_004308
TCONS_00008295 other upstream 2017017 44123327 ~ 44123458 (-) True XLOC_004381
TCONS_00008303 other upstream 2230847 44337157 ~ 44339220 (-) True XLOC_004385
TCONS_00008317 other upstream 2500541 44606851 ~ 44613734 (-) False XLOC_004396
TCONS_00008372 other upstream 3325223 45431533 ~ 45435014 (-) False XLOC_004416

Expression Profile

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