RNA id: TCONS_00008258


Basic Information

Item Value
RNA id TCONS_00008258
length 474
RNA type mRNA
GC content 0.54
exon number 4
gene id XLOC_004354
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 42128552 ~ 42134968 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGCAAACTCTTCTCTTGCACTACACACCGATGGCCCCTGGAAACTACATCATCACTGCCAAATACGGAGGTCCCAACCACATCACCGGCAGCCCGTTCAAAGCCAAAGTGACCGGTCCGCGTCTGGTGAACGTGAGCAGCGTGAGTGAAATGTCATGTCTGATGGTGGATTCCGTGACTCGCTCCACCAGCTCGTCTGCCAGCAGGGTCAGCAGTCGAGGCCCTGGACTCAGCAAGGCCTTCATCAGCCAGAAAGCCTCTTTCACTGTTGACTGCAGTAAAGCTGggaagAACATGCTCCTGGTGGGTGTTCACGGTCCTCAAACCCCCTGCGAGGAAATCCTGGTCAAACACATGGGAAACATGCAATACAACGTCAGCTATGTCCTGAAGGAGCGAGGAAACTACATTCTGGCTGTCAAATGGGGAGATGAACACATCCCAGGCTCTCCATTCACTGTCACCGTCCCATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000187115

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008492 lncRNA downstream 3270 42113072 ~ 42125282 (-) True XLOC_004352
TCONS_00008868 lncRNA downstream 4281 42122748 ~ 42124271 (-) True XLOC_004353
TCONS_00008493 lncRNA downstream 4300 42121855 ~ 42124252 (-) False XLOC_004353
TCONS_00008867 lncRNA downstream 84271 42042562 ~ 42044281 (-) True XLOC_004349
TCONS_00008865 lncRNA downstream 101954 42004163 ~ 42026598 (-) True XLOC_004347
TCONS_00008494 lncRNA upstream 16476 42151444 ~ 42152573 (-) True XLOC_004356
TCONS_00008495 lncRNA upstream 600296 42735264 ~ 42735848 (-) True XLOC_004362
TCONS_00008496 lncRNA upstream 607566 42742534 ~ 42745180 (-) True XLOC_004363
TCONS_00008497 lncRNA upstream 617933 42752901 ~ 42754000 (-) False XLOC_004364
TCONS_00008869 lncRNA upstream 674546 42809514 ~ 42817704 (-) True XLOC_004365
TCONS_00008257 mRNA downstream 22242 42101661 ~ 42106310 (-) True XLOC_004351
TCONS_00008256 mRNA downstream 28907 42062067 ~ 42099645 (-) True XLOC_004350
TCONS_00008255 mRNA downstream 131595 41994287 ~ 41996957 (-) True XLOC_004346
TCONS_00008254 mRNA downstream 161698 41966117 ~ 41966854 (-) True XLOC_004344
TCONS_00008253 mRNA downstream 274678 41846059 ~ 41853874 (-) True XLOC_004343
TCONS_00008259 mRNA upstream 15928 42150896 ~ 42230491 (-) True XLOC_004355
TCONS_00008260 mRNA upstream 169617 42304585 ~ 42418374 (-) False XLOC_004357
TCONS_00008261 mRNA upstream 172597 42307565 ~ 42315748 (-) False XLOC_004357
TCONS_00008262 mRNA upstream 172809 42307777 ~ 42417194 (-) False XLOC_004357
TCONS_00008265 mRNA upstream 176006 42310974 ~ 42417194 (-) False XLOC_004357
TCONS_00008250 other downstream 753426 41375011 ~ 41375126 (-) True XLOC_004339
TCONS_00008244 other downstream 1044189 41078191 ~ 41084363 (-) True XLOC_004334
TCONS_00008236 other downstream 1432416 40678213 ~ 40696136 (-) True XLOC_004327
TCONS_00008222 other downstream 1945756 40182681 ~ 40182796 (-) True XLOC_004319
TCONS_00008210 other downstream 3038561 39089875 ~ 39089991 (-) True XLOC_004308
TCONS_00008295 other upstream 1988359 44123327 ~ 44123458 (-) True XLOC_004381
TCONS_00008303 other upstream 2202189 44337157 ~ 44339220 (-) True XLOC_004385
TCONS_00008317 other upstream 2471883 44606851 ~ 44613734 (-) False XLOC_004396
TCONS_00008372 other upstream 3296565 45431533 ~ 45435014 (-) False XLOC_004416

Expression Profile

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