RNA id: TU99017



Basic Information


Item Value
RNA id TU99017
length 318
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G79405
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 22084247 ~ 22084564 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTGGAGGAACCAATCTGACCTGAGAGGGAAGAGCACGCAGTAGCGAATGACAACTCCCACAGCCCAGATGATGGTGAGACGGAGGCTGATATATTGGAAGTTGTTGTTAGTGCGCGTGAGCAGATTCCAGGAGACGAGCTCCTCCGAGGTAAAGCGCTGGGTGACCTCATCCTCCACGATGGACTCAATGCCCTTCTTGTTGAAGTAGAAGACGTGGCTCAGCTGGAAGTCACCGCTGGCTGGGGGCTTACTGTTGCTGTTCATCAACTCTGATATCTCCTTCTCCATTGAGGAGCTTCCATCCCTCTGGATGATCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU99016 lncRNA downstream 4806 22079203 ~ 22079441 (-) True G79404
TU99015 lncRNA downstream 7391 22076546 ~ 22076856 (-) True G79403
TU98980 lncRNA downstream 54292 22029604 ~ 22029955 (-) True G79372
TU98975 lncRNA downstream 63231 22018848 ~ 22021016 (-) True G79367
TU98976 lncRNA downstream 66310 22016717 ~ 22017937 (-) True G79368
TU99018 lncRNA upstream 7035 22091599 ~ 22091976 (-) True G79406
TU99019 lncRNA upstream 12274 22096838 ~ 22098788 (-) True G79407
TU99042 lncRNA upstream 223554 22308118 ~ 22308320 (-) True G79424
TU99051 lncRNA upstream 296170 22380734 ~ 22383130 (-) True G79430
TU99106 lncRNA upstream 597101 22681665 ~ 22694959 (-) True G79466
AMCG00010268 mRNA downstream 8164 22069126 ~ 22076083 (-) True AMCG00010268
AMCG00010269 mRNA downstream 19892 22049997 ~ 22064355 (-) True AMCG00010269
AMCG00010270 mRNA downstream 40768 22030994 ~ 22043479 (-) True AMCG00010270
AMCG00010267 mRNA downstream 72455 22007414 ~ 22011792 (-) True AMCG00010267
AMCG00010271 mRNA downstream 102197 21966326 ~ 21982050 (-) False AMCG00010271
AMCG00010273 mRNA upstream 265836 22350400 ~ 22354352 (-) True AMCG00010273
AMCG00010274 mRNA upstream 273418 22357982 ~ 22361854 (-) True AMCG00010274
AMCG00010275 mRNA upstream 343805 22428369 ~ 22432273 (-) True AMCG00010275
AMCG00010276 mRNA upstream 351860 22436424 ~ 22443529 (-) True AMCG00010276
AMCG00010277 mRNA upstream 367625 22452189 ~ 22530542 (-) True AMCG00010277
TU98958 other downstream 102273 21964529 ~ 21981974 (-) True AMCG00010271
TU98765 other downstream 1002422 21075941 ~ 21081825 (-) False AMCG00010247
TU98705 other downstream 1142854 20931171 ~ 20941393 (-) True G79147
TU98072 other downstream 4138486 17945235 ~ 17945761 (-) True G78610
TU98067 other downstream 4228517 17852867 ~ 17855730 (-) False AMCG00010190
TU99198 other upstream 998282 23082846 ~ 23085985 (-) False AMCG00010288
TU99273 other upstream 1275079 23359643 ~ 23364947 (-) True G79601
TU99963 other upstream 4288178 26372742 ~ 26379747 (-) True AMCG00010364
TU101107 other upstream 9869820 31954384 ~ 31971755 (-) True AMCG00010487
TU101338 other upstream 10910886 32995450 ~ 32999999 (-) False AMCG00010509

Expression Profile