RNA id: TU99019


Basic Information

Item Value
RNA id TU99019
length 1951
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G79407
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 22096838 ~ 22098788 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tatattaaattgtttattgtaacacatttttaagaaaaaattgattAGAATGCTTAGAATTACTGGACATCTCCTTTGCTTCTGTGTGGGTGTCCAGAtctacacacacaagcaaaacaaTAGGTTAAGCATGAGAGCAAATTAGGAGAATAACAATGTAATACGTTTGAATAGAAAACAATGTAGaggaacaaataattaaatacaaaggtACAAAAGATCAGCTCCTATATACCTCTACAACAGAATATATTTCTGTTAACCCTCTATAATGAATACGTTACAAGAGCCGATTCAGTCACACCAATGCAATCTCCCCGTTAAAAAAATCCATATTCCACAATCTATATCTGTATTAAAACTCAGGTAATGGTGACGTCCTCCACGCGATTATCTCACCCACATCTTCAATATAAAATTAGAACCATGAAGCACTCTGaagggtatttatttttaaactgtagttTAATTCAGGGATATAATGGCATagttggtttgtgttttgagcTGCCTAGGGTGAAGAGTGCCACCCAGTGGATTTAATTCATTGCTACCACCTGCAAATTCATTCCATTGGAAGCAACTGAACACAAGAATTGGTAAGCAGCAACTGACTTAATTTCAGCTTGACTGGGATCCTCATTGATATCCTATAATCTACCACTTGTGTCTTCCTATGTTTGAACTGTTCATAAGTAACAGAGGTATTTAAGCTTGAACAATAAGTCAGACAACCAATAGGACTCCTCAGTAGTAAGGAACTCAAATAGCAAAGTCAATGTGTTGACTAGATGGCTCCAATGCAGCTAATCAGATTGGTATATTCTGTAGTTTATAGTATATTATATGTATCTGTGTCCACATAGAATCAAGAGAACCCACTCTAATCACGGTCTTATTAAGTCTTCAGTCCCTGATTGGATCCCATCTCtcaattcaaaacacaaatctgaaTCACTGATCTAGGAGCATAACAATGTGCTCTGCTTATCTGCTATAGTATTTAAAgaactgcatttattaaatcaacAGGACTAACCACTATAACCCCTGCGCTAGCAAAGAAGATGAGGACAGAACTGCGTTGTCAGCCCACTCACTccttttcacactgcaagtcCACTGTGCGAACAGCAGAGATACAGCGAGGATTAACTCTCATTGATACTACCACAGGTTAACTTTCGATTGaatgaattataataatgttgGACTCTAGACCTCtaaagtataatataaaaaactaattttaaggTTTGCAAGATcatatattttgcatatataaaggtttattgtaAAACTGATTGCTTACACAGTACTGAAGAAACTGGTGGGCAGTATGATCCAAAAGTTATCCAAGTATGTCCTGCAGTGCATATCTGTAATAAGGTCATTTGCCTTCACAGAATAACTGGTGCAGAACAGAAATTCtacaaacattaacattacCAAACAACATCttgtgatatgtttttattaatattaaacttctaaaccaaacaaaacaattcccaAATCAACCAAgtgcagtgttttgtatttatttagacttAATTGTGGACATTCTTGGGTGACGGGCAATTTCAACTACATTTCTCACTGAACATGttatttcgttttttgtttcttcagtgtTCAGTGCTTCCTCTCTGGTGGAGTGGTATTTGATCTGTAACTGTTTGGCTGGTTTCATATAACTTTTCCCTTTAAGGAAGACTCTGGCACTCGAATGTGCCTTGGCATAATTGCTTTTACAAGTTGTAATGGAAGTGTAATTTATTCATGACTGgaagggtgtgtgtgtacagcGCATTGGGACCTGAAGTGCATGCCCTGGAAAGCAGGCCCCTGTTTCAGTTCAGTTGCTGTCGTCTCCAACGATCATGttgctgtacattttctgttgcAACTCCTTGTAAGTCTCTTTAACCTTTGCCCTCTTCAAGCCACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99018 lncRNA downstream 4862 22091599 ~ 22091976 (-) True G79406
TU99017 lncRNA downstream 12274 22084247 ~ 22084564 (-) True G79405
TU99016 lncRNA downstream 17397 22079203 ~ 22079441 (-) True G79404
TU99015 lncRNA downstream 19982 22076546 ~ 22076856 (-) True G79403
TU98980 lncRNA downstream 66883 22029604 ~ 22029955 (-) True G79372
TU99042 lncRNA upstream 209330 22308118 ~ 22308320 (-) True G79424
TU99051 lncRNA upstream 281946 22380734 ~ 22383130 (-) True G79430
TU99106 lncRNA upstream 582877 22681665 ~ 22694959 (-) True G79466
TU99134 lncRNA upstream 636207 22734995 ~ 22735440 (-) True G79483
TU99199 lncRNA upstream 997814 23096602 ~ 23097308 (-) True G79541
AMCG00010268 mRNA downstream 20755 22069126 ~ 22076083 (-) True AMCG00010268
AMCG00010269 mRNA downstream 32483 22049997 ~ 22064355 (-) True AMCG00010269
AMCG00010270 mRNA downstream 53359 22030994 ~ 22043479 (-) True AMCG00010270
AMCG00010267 mRNA downstream 85046 22007414 ~ 22011792 (-) True AMCG00010267
AMCG00010271 mRNA downstream 114788 21966326 ~ 21982050 (-) False AMCG00010271
AMCG00010273 mRNA upstream 251612 22350400 ~ 22354352 (-) True AMCG00010273
AMCG00010274 mRNA upstream 259194 22357982 ~ 22361854 (-) True AMCG00010274
AMCG00010275 mRNA upstream 329581 22428369 ~ 22432273 (-) True AMCG00010275
AMCG00010276 mRNA upstream 337636 22436424 ~ 22443529 (-) True AMCG00010276
AMCG00010277 mRNA upstream 353401 22452189 ~ 22530542 (-) True AMCG00010277
TU98958 other downstream 114864 21964529 ~ 21981974 (-) True AMCG00010271
TU98765 other downstream 1015013 21075941 ~ 21081825 (-) False AMCG00010247
TU98705 other downstream 1155445 20931171 ~ 20941393 (-) True G79147
TU98072 other downstream 4151077 17945235 ~ 17945761 (-) True G78610
TU98067 other downstream 4241108 17852867 ~ 17855730 (-) False AMCG00010190
TU99198 other upstream 984058 23082846 ~ 23085985 (-) False AMCG00010288
TU99273 other upstream 1260855 23359643 ~ 23364947 (-) True G79601
TU99963 other upstream 4273954 26372742 ~ 26379747 (-) True AMCG00010364
TU101107 other upstream 9855596 31954384 ~ 31971755 (-) True AMCG00010487
TU101338 other upstream 10896662 32995450 ~ 32999999 (-) False AMCG00010509

Expression Profile