RNA id: TU99042


Basic Information

Item Value
RNA id TU99042
length 203
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G79424
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 22308118 ~ 22308320 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTCAgggtggtgatgtgctgggtgtaggagagcgcaggatcgagggtgactcctagatttttagcggaagaagaaggagagagtgtggtggattccaaggggatcgagatggggaggtcagcagaaggtgaggaagagtgggggaaaaacaggagatctgatttggagaggttgagcttgaggtggtgcgagtgcatccaggt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99019 lncRNA downstream 209330 22096838 ~ 22098788 (-) True G79407
TU99018 lncRNA downstream 216142 22091599 ~ 22091976 (-) True G79406
TU99017 lncRNA downstream 223554 22084247 ~ 22084564 (-) True G79405
TU99016 lncRNA downstream 228677 22079203 ~ 22079441 (-) True G79404
TU99015 lncRNA downstream 231262 22076546 ~ 22076856 (-) True G79403
TU99051 lncRNA upstream 72414 22380734 ~ 22383130 (-) True G79430
TU99106 lncRNA upstream 373345 22681665 ~ 22694959 (-) True G79466
TU99134 lncRNA upstream 426675 22734995 ~ 22735440 (-) True G79483
TU99199 lncRNA upstream 788282 23096602 ~ 23097308 (-) True G79541
TU99200 lncRNA upstream 800533 23108853 ~ 23109092 (-) True G79542
AMCG00010268 mRNA downstream 232035 22069126 ~ 22076083 (-) True AMCG00010268
AMCG00010269 mRNA downstream 243763 22049997 ~ 22064355 (-) True AMCG00010269
AMCG00010270 mRNA downstream 264639 22030994 ~ 22043479 (-) True AMCG00010270
AMCG00010267 mRNA downstream 296326 22007414 ~ 22011792 (-) True AMCG00010267
AMCG00010271 mRNA downstream 326068 21966326 ~ 21982050 (-) False AMCG00010271
AMCG00010273 mRNA upstream 42080 22350400 ~ 22354352 (-) True AMCG00010273
AMCG00010274 mRNA upstream 49662 22357982 ~ 22361854 (-) True AMCG00010274
AMCG00010275 mRNA upstream 120049 22428369 ~ 22432273 (-) True AMCG00010275
AMCG00010276 mRNA upstream 128104 22436424 ~ 22443529 (-) True AMCG00010276
AMCG00010277 mRNA upstream 143869 22452189 ~ 22530542 (-) True AMCG00010277
TU98958 other downstream 326144 21964529 ~ 21981974 (-) True AMCG00010271
TU98765 other downstream 1226293 21075941 ~ 21081825 (-) False AMCG00010247
TU98705 other downstream 1366725 20931171 ~ 20941393 (-) True G79147
TU98072 other downstream 4362357 17945235 ~ 17945761 (-) True G78610
TU98067 other downstream 4452388 17852867 ~ 17855730 (-) False AMCG00010190
TU99198 other upstream 774526 23082846 ~ 23085985 (-) False AMCG00010288
TU99273 other upstream 1051323 23359643 ~ 23364947 (-) True G79601
TU99963 other upstream 4064422 26372742 ~ 26379747 (-) True AMCG00010364
TU101107 other upstream 9646064 31954384 ~ 31971755 (-) True AMCG00010487
TU101338 other upstream 10687130 32995450 ~ 32999999 (-) False AMCG00010509

Expression Profile