Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU230446 |
| length | 380 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G170209 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 26136775 ~ 26137154 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | description |
|---|---|
| ko04512 | ECM-receptor interaction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230434 | lncRNA | downstream | 63600 | 26072721 ~ 26073175 (-) | True | G170198 |
| TU230400 | lncRNA | downstream | 267674 | 25866117 ~ 25869101 (-) | True | G170170 |
| TU230371 | lncRNA | downstream | 324972 | 25796700 ~ 25811803 (-) | True | G170146 |
| TU230259 | lncRNA | downstream | 621344 | 25514996 ~ 25515431 (-) | True | G170067 |
| TU230234 | lncRNA | downstream | 710580 | 25425786 ~ 25426195 (-) | True | G170045 |
| TU230449 | lncRNA | upstream | 663 | 26137817 ~ 26138240 (-) | True | G170210 |
| TU230452 | lncRNA | upstream | 59170 | 26196324 ~ 26196679 (-) | True | G170213 |
| TU230484 | lncRNA | upstream | 89334 | 26226488 ~ 26231182 (-) | False | LOC103029246 |
| TU230490 | lncRNA | upstream | 174622 | 26311776 ~ 26320118 (-) | True | G170245 |
| TU230494 | lncRNA | upstream | 190789 | 26327943 ~ 26330624 (-) | True | G170248 |
| XM_007260596.3 | mRNA | downstream | 105390 | 26029478 ~ 26031385 (-) | True | LOC103035301 |
| XM_022680482.1 | mRNA | downstream | 231159 | 25798510 ~ 25905616 (-) | True | LOC103030841 |
| XM_022680481.1 | mRNA | downstream | 355774 | 25774326 ~ 25781001 (-) | True | LOC111194933 |
| XM_022680479.1 | mRNA | downstream | 382184 | 25731814 ~ 25754591 (-) | True | LOC103035604 |
| XM_022680478.1 | mRNA | downstream | 422904 | 25685067 ~ 25713871 (-) | False | LOC103035913 |
| XM_022680485.1 | mRNA | upstream | 89303 | 26226457 ~ 26252266 (-) | False | LOC103029246 |
| XM_022680484.1 | mRNA | upstream | 89303 | 26226457 ~ 26252266 (-) | True | LOC103029246 |
| XM_022680488.1 | mRNA | upstream | 500422 | 26637576 ~ 26647990 (-) | True | LOC103038930 |
| XM_007260437.3 | mRNA | upstream | 516020 | 26653174 ~ 26663616 (-) | True | LOC103038625 |
| XM_007260436.3 | mRNA | upstream | 526873 | 26664027 ~ 26670958 (-) | True | LOC103038316 |
| TU230416 | other | downstream | 231293 | 25896595 ~ 25905482 (-) | False | LOC103030841 |
| TU230256 | other | downstream | 627359 | 25502135 ~ 25509416 (-) | False | LOC111194864 |
| TU230159 | other | downstream | 1812270 | 24312583 ~ 24324505 (-) | True | G169980 |
| TU229637 | other | downstream | 3241343 | 22894768 ~ 22895432 (-) | True | G169567 |
| TU229422 | other | downstream | 3778368 | 22338439 ~ 22358407 (-) | False | man1a2 |
| TU230949 | other | upstream | 1763640 | 27900794 ~ 27902899 (-) | False | LOC111194963 |
| TU231269 | other | upstream | 2548896 | 28686050 ~ 28687679 (-) | True | G170854 |
| TU231746 | other | upstream | 5763194 | 31900348 ~ 31903527 (-) | False | gabpa |
| TU232121 | other | upstream | 6621364 | 32758518 ~ 32772132 (-) | True | ndp |
| TU232221 | other | upstream | 7036899 | 33174053 ~ 33176284 (-) | True | G171553 |
